RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FBXL8Q96CD0 374 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 DUSP21Q9H596 190 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 POU2F3Q9UKI9 436 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 TSC22D4Q9Y3Q8 395 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 DAGLAQ9Y4D2 1042 aa5.22□□□□□ -1.57
RIF1-203ENST00000428287 TRIM38O00635 465 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 XPOTO43592 962 aaKnown RBP5.21□□□□□ -1.57
RIF1-203ENST00000428287 GABARAPO95166 117 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 SLC16A2P36021 539 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 NRLP54845 237 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 TRIM16LQ309B1 348 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 BOLA3Q53S33 107 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 COQ5Q5HYK3 327 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 MDH1BQ5I0G3 518 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 ZBTB41Q5SVQ8 909 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 TMTC4Q5T4D3 741 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 DNAJC24Q6P3W2 148 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 ABRAXAS1Q6UWZ7 409 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 PQLC3Q8N755 202 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 RDM1Q8NG50 284 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 LILRB4Q8NHJ6 448 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 FBLIM1Q8WUP2 373 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 CANT1Q8WVQ1 401 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 POLR1BQ9H9Y6 1135 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 OXSMQ9NWU1 459 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 PCDHGA7Q9Y5G6 932 aa5.21□□□□□ -1.57
RIF1-203ENST00000428287 CRHBPP24387 322 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 WNT7BP56706 349 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MTM1Q13496 603 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SF3B4Q15427 424 aaKnown RBP eCLIP5.21□□□□□ -1.581e-6■■■□□ 18.7
RIF1-203ENST00000428287 PPM1LQ5SGD2 360 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 DCUN1D2Q6PH85 259 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SLC16A12Q6ZSM3 486 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 VASH1Q7L8A9 365 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 PODNQ7Z5L7 613 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SPRED1Q7Z699 444 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SNX32Q86XE0 403 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 FUNDC1Q8IVP5 155 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ADGRG5Q8IZF4 528 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PELI3Q8N2H9 469 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 GALNT6Q8NCL4 622 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 URGCPQ8TCY9 931 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SEPT8Q92599 483 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 CCDC138Q96M89 665 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ZDHHC15Q96MV8 337 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 DCUN1D5Q9BTE7 237 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PI4K2AQ9BTU6 479 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SLC4A5Q9BY07 1137 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PNPOQ9NVS9 261 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 TTC34A8MYJ7 566 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 E7ENX8 843 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 IDH3BO43837 385 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 INAVAQ3KP66 663 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 C6orf10Q5SRN2 563 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PPP2R2DQ66LE6 453 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 HHIPL2Q6UWX4 724 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 HEATR4Q86WZ0 1026 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MINDY1Q8N5J2 469 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 BHLHE22Q8NFJ8 381 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 OR7G1Q8NGA0 311 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 DDX17Q92841 729 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 RCN3Q96D15 328 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MRRFQ96E11 262 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 NRBF2Q96F24 287 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 C9orf16Q9BUW7 83 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MUC3BQ9H195 1237 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 APOBEC3GQ9HC16 384 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 PSAT1Q9Y617 370 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 CFAP99D6REC4 459 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 GNPATO15228 680 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 NAGLUP54802 743 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MYL6P60660 151 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 BASP1P80723 227 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 CYTH1Q15438 398 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SMUG1Q53HV7 270 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 C6orf183Q5T699 404 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 EGFLAMQ63HQ2 1017 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SLFN13Q68D06 897 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 APOBEC3HQ6NTF7 200 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 RSBN1LQ6PCB5 846 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 MYO1HQ8N1T3 1032 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 FAM71DQ8N9W8 422 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 CENPNQ96H22 339 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 WNK4Q96J92 1243 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 TRIM56Q9BRZ2 755 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 ZNF670Q9BS34 389 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 EHD1Q9H4M9 534 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ATP13A3Q9H7F0 1226 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 GMIPQ9P107 970 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PI4KBQ9UBF8 816 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ADAM28Q9UKQ2 775 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 AIM2O14862 343 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ABCB7O75027 752 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 STBD1O95210 358 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 KRT5P13647 590 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 SLC6A2P23975 617 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ACADSBP45954 432 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 GTF2IP78347 998 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms