RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 KCNT1Q5JUK3 1230 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 ERMARDQ5T6L9 678 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 DBX2Q6ZNG2 339 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 ARRDC3Q96B67 414 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 CAMK1GQ96NX5 476 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 EIF3CQ99613 913 aaKnown RBP13.37□□□□□ -0.27
PHF1-205ENST00000428274 HDAC8Q9BY41 377 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 CATSPERBQ9H7T0 1116 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 IL21RQ9HBE5 538 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 MRPL47Q9HD33 250 aaKnown RBP13.37□□□□□ -0.27
PHF1-205ENST00000428274 IL36AQ9UHA7 158 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 NENFQ9UMX5 172 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 AP4E1Q9UPM8 1137 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 FNDC3AQ9Y2H6 1198 aaKnown RBP13.37□□□□□ -0.27
PHF1-205ENST00000428274 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
PHF1-205ENST00000428274 SNX11Q9Y5W9 270 aa13.37□□□□□ -0.27
PHF1-205ENST00000428274 A0A1W2PR77 199 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 ZSCAN5CA6NGD5 496 aaPredicted RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 KPNA3O00505 521 aaPredicted RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 WNT9AO14904 365 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 VILLO15195 856 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 LRCH4O75427 683 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 LEFTY1O75610 366 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 RNF8O76064 485 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 CER1O95813 267 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 WNT1P04628 370 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 MIPP30301 263 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 CTSKP43235 329 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 RECQLP46063 649 aaPredicted RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 CCNHP51946 323 aaPredicted RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 ACAP1Q15027 740 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 PARP15Q460N3 678 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 LAYNQ6UX15 382 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 VPS36Q86VN1 386 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 TRIM69Q86WT6 500 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 PSTKQ8IV42 348 aaKnown RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 GRIN3AQ8TCU5 1115 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 SLC6A18Q96N87 628 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.36□□□□□ -0.27
PHF1-205ENST00000428274 SNRNP25Q9BV90 132 aaKnown RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 TMEM121BQ9BXQ6 578 aaPredicted RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 KLC2Q9H0B6 622 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 TSPY26PQ9H489 355 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 SLC32A1Q9H598 525 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 PREBQ9HCU5 417 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 GPATCH2LQ9NWQ4 482 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 MYO1AQ9UBC5 1043 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 HPCAL4Q9UM19 191 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 PCDHGB2Q9Y5G2 931 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.36□□□□□ -0.277e-10■■■■■ 36.7
PHF1-205ENST00000428274 TDRD6O60522 2096 aaKnown RBP13.36□□□□□ -0.27
PHF1-205ENST00000428274 FREM2Q5SZK8 3169 aa13.36□□□□□ -0.27
PHF1-205ENST00000428274 C1QTNF9BB2RNN3 333 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 RASA4BC9J798 803 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 RASA4O43374 803 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 SH3BP5O60239 455 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 GSRP00390 522 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 CYP1A2P05177 515 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 TPM3P06753 285 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 C1QTNF9P0C862 333 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 ITGB7P26010 798 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 CD38P28907 300 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 PCK1P35558 622 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 NUDT1P36639 197 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 TPI1P60174 286 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 SERINC3Q13530 473 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 ST3GAL2Q16842 350 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 ZNF423Q2M1K9 1284 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 INO80DQ53TQ3 878 aaPredicted RBP13.35□□□□□ -0.27
PHF1-205ENST00000428274 NEK5Q6P3R8 708 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 LEKR1Q6ZMV7 388 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
PHF1-205ENST00000428274 CASKIN2Q8WXE0 1202 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 HMCESQ96FZ2 354 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 LRIG1Q96JA1 1093 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
PHF1-205ENST00000428274 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 THAP2Q9H0W7 228 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 DHX35Q9H5Z1 703 aaKnown RBP13.35□□□□□ -0.27
PHF1-205ENST00000428274 LRRC19Q9H756 370 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 TM7SF3Q9NS93 570 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 DONSONQ9NYP3 566 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 HECAQ9UBI9 543 aaPredicted RBP13.35□□□□□ -0.27
PHF1-205ENST00000428274 DMTF1Q9Y222 760 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 ACACAQ13085 2346 aa13.35□□□□□ -0.27
PHF1-205ENST00000428274 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 BUB1O43683 1085 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 PRPSAP2O60256 369 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 CBFA2T3O75081 653 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 IL1R2P27930 398 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 HCAR3P49019 387 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 DNA2P51530 1060 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 NDST2P52849 883 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
PHF1-205ENST00000428274 AFMIDQ63HM1 303 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms