RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NANOGQ9H9S0 305 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LIN28AQ9H9Z2 209 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SCPEP1Q9HB40 452 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZFYVE28Q9HCC9 887 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPAG4Q9NPE6 437 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP26B1Q9NR63 512 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF277Q9NRM2 450 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 AASDHPPTQ9NRN7 309 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TOPORSQ9NS56 1045 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 FARSBQ9NSD9 589 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 INTS10Q9NVR2 710 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SMPD3Q9NY59 655 aaPredicted RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 B3GNT2Q9NY97 397 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRMT6Q9UJA5 497 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 MOSPD1Q9UJG1 213 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 POU2F3Q9UKI9 436 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 KIAA1257Q9ULG3 409 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDC14AQ9UNH5 594 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SUGT1Q9Y2Z0 365 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 RNF11Q9Y3C5 154 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCDHGA3Q9Y5H0 932 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCDHA2Q9Y5H9 948 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SNX13Q9Y5W8 968 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SNCAIPQ9Y6H5 919 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCNE2Q9Y6J6 123 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SESN1Q9Y6P5 492 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLX4Q8IY92 1834 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 CNTNAP1P78357 1384 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 AKAP11Q9UKA4 1901 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 A0A1W2PRG6 482 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 DENND3A2RUS2 1198 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HNRNPCL2B2RXH8 293 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIM49D1C9J1S8 452 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ATP5J2-PTCD1G3V325 749 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 H3BMM5 538 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PIK3R2O00459 728 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 APOL1O14791 398 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIM24O15164 1050 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TBC1D4O60343 1298 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PTCD1O75127 700 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 UGT2B11O75310 529 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 AVILO75366 819 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 AKAP3O75969 853 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PDE9AO76083 593 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR7A10O76100 309 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM13AO94988 1023 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 RASAL1O95294 804 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 GCNT3O95395 438 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SEC24AO95486 1093 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HSPA4LO95757 839 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TGM6O95932 706 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HPRP00739 348 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ERBB2P04626 1255 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PGK2P07205 417 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 GSTM1P09488 218 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP2D6P10635 497 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 C4BPBP20851 252 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYP7A1P22680 504 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CES1P23141 567 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 DNAJB1P25685 340 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PIK3R1P27986 724 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HADHAP40939 763 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 OPRL1P41146 370 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 MARCKSL1P49006 195 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 NUMBP49757 651 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 IDH3AP50213 366 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SCNN1DP51172 638 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 KPNA2P52292 529 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PEX3P56589 373 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 MYL6P60660 151 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ABCE1P61221 599 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDKL1Q00532 357 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PMS2P3Q13401 168 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SCARF1Q14162 830 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TAF5Q15542 800 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TAB1Q15750 504 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 CRY1Q16526 586 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 HIST2H2ACQ16777 129 aaPredicted RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 BBS9Q3SYG4 887 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 LEXMQ3ZCV2 418 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC36A3Q495N2 470 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 KLHL12Q53G59 568 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FASTKD1Q53R41 847 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 RUNDC3AQ59EK9 446 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFDP3Q5H9I0 405 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 RALGPS1Q5JS13 557 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF484Q5JVG2 852 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PERM1Q5SV97 790 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FCRLBQ6BAA4 426 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 MRPL14Q6P1L8 145 aaKnown RBP5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 PNCKQ6P2M8 343 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 DCUN1D2Q6PH85 259 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAMDC4Q6UXC1 1216 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 RNF111Q6ZNA4 994 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 FRMD7Q6ZUT3 714 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 POLNQ7Z5Q5 900 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 LUZP2Q86TE4 346 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 TLK2Q86UE8 772 aa5.68□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC22A16Q86VW1 577 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms