RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SRPRAP08240 638 aaKnown RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 FAM157BP0CG42 384 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 TNNT1P13805 278 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 GLDCP23378 1020 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 CTNNA2P26232 953 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 NTSR1P30989 418 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 GJC1P36383 396 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 ARL4AP40617 200 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 IL12RB1P42701 662 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 CXCL12P48061 93 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 NDST2P52849 883 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 NAP1L1P55209 391 aaKnown RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 YBEYP58557 167 aaPredicted RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 ECT2LQ008S8 904 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 SATB1Q01826 763 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 KRT81Q14533 505 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 CRY1Q16526 586 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 TAZQ16635 292 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 IFI16Q16666 785 aaKnown RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 ANKRD20A8PQ5CZ79 823 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF783Q6ZMS7 281 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 NT5DC3Q86UY8 548 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 C1orf210Q8IVY1 113 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 REXO1L1PQ8IX06 675 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 TP53INP2Q8IXH6 220 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 PQLC3Q8N755 202 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 KDM1BQ8NB78 822 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 TXNDC5Q8NBS9 432 aaKnown RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 UCMAQ8WVF2 138 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 KRT35Q92764 455 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 FAF2Q96CS3 445 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 RPL10LQ96L21 214 aaKnown RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 RNF157Q96PX1 679 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 GABRG3Q99928 467 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 SPON2Q9BUD6 331 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 SLC39A8Q9C0K1 460 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 LRRC19Q9H756 370 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 KLHL11Q9NVR0 708 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 SPATA6Q9NWH7 488 aaPredicted RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 CACNA2D2Q9NY47 1150 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 DDX56Q9NY93 547 aaKnown RBP7.58□□□□□ -1.2
LINC01049-201ENST00000426840 VPS28Q9UK41 221 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 PLA2G4CQ9UP65 541 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 CAPN6Q9Y6Q1 641 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 KMT2EQ8IZD2 1858 aa7.58□□□□□ -1.2
LINC01049-201ENST00000426840 CXorf51AA0A1B0GTR3 108 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 LRRD1A4D1F6 860 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 TTC34A8MYJ7 566 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF487B1APH4 448 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 RASA4BC9J798 803 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 DDX3YO15523 660 aaKnown RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 RASA4O43374 803 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 LAMTOR5O43504 91 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 PSTPIP1O43586 416 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 KDELR3O43731 214 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 RAMP2O60895 175 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 TDGF1P13385 188 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 PRKCHP24723 683 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 HOXA6P31267 233 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 CTNNA1P35221 906 aaKnown RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 MARCKSL1P49006 195 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 STK19P49842 368 aaPredicted RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 CCR3P51677 355 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 ARF5P84085 180 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SULT2A1Q06520 285 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SLC20A2Q08357 652 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SFSWAPQ12872 951 aaKnown RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SLC10A2Q12908 348 aaPredicted RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SERINC3Q13530 473 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 POLD3Q15054 466 aaPredicted RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 PAFAH1B3Q15102 231 aaKnown RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 E2F5Q15329 346 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 EOGTQ5NDL2 527 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 SDE2Q6IQ49 451 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 KIAA1211LQ6NV74 962 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 MFSD7Q6UXD7 560 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 TRMT11Q7Z4G4 463 aaKnown RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 VSIG1Q86XK7 387 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 MAP7D3Q8IWC1 876 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 KATNAL2Q8IYT4 538 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 RCOR2Q8IZ40 523 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 CHPFQ8IZ52 775 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 LZTR1Q8N653 840 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 NPWQ8N729 165 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 DCAF4L2Q8NA75 395 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 NETO2Q8NC67 525 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 FRS2Q8WU20 508 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 PTPRN2Q92932 1015 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 HMCESQ96FZ2 354 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 CELF6Q96J87 481 aaKnown RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF670Q9BS34 389 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 CALN1Q9BXU9 219 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 TSGA10Q9BZW7 698 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 MTG2Q9H4K7 406 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 ATP13A1Q9HD20 1204 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 LZTFL1Q9NQ48 299 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 PRMT8Q9NR22 394 aaPredicted RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 DONSONQ9NYP3 566 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms