RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CTSKP43235 329 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 YBEYP58557 167 aaPredicted RBP18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 TPI1P60174 286 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 RACK1P63244 317 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 SLC14A1Q13336 389 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 SERINC3Q13530 473 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 PLPP6Q8IY26 295 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 NETO2Q8NC67 525 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 BTBD6Q96KE9 485 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 CAMK1GQ96NX5 476 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 HEPHQ9BQS7 1158 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 CATSPERBQ9H7T0 1116 aa18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 MRPL47Q9HD33 250 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-202ENST00000423945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.16■□□□□ 0.55e-7■■■■□ 25.2
SBDSP1-202ENST00000423945 EPG5Q9HCE0 2579 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 EEF2KO00418 725 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 VILLO15195 856 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 FGF10O15520 208 aaPredicted RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 SH3BP5O60239 455 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 RNF8O76064 485 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 CYP1A2P05177 515 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 DESP17661 470 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 MAT2AP31153 395 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 HTR7P34969 479 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 EIF4A3P38919 411 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 RECQLP46063 649 aaPredicted RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 DNA2P51530 1060 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 TEAD4Q15561 434 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 SPECC1LQ69YQ0 1117 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 TXNRD3NBQ6F5E7 133 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 IL27RAQ6UWB1 636 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 ERN2Q76MJ5 926 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 VSTM4Q8IW00 320 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 OR6K2Q8NGY2 324 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 DNAJC7Q99615 494 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 HDAC8Q9BY41 377 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 PDFQ9HBH1 243 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 PREBQ9HCU5 417 aa18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 TPRP12270 2363 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-202ENST00000423945 SPEGQ15772 3267 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 EIF3CLB5ME19 914 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 H0Y8X5 98 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 CBFA2T2O43439 604 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 BUB1O43683 1085 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 PRPSAP2O60256 369 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 TMCC1O94876 653 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 CER1O95813 267 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 GSRP00390 522 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ZNF883P0CG24 379 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ERCC2P18074 760 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 PCK1P35558 622 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 GEMIN4P57678 1058 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ZNF423Q2M1K9 1284 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ASTE1Q2TB18 679 aaPredicted RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 PARP15Q460N3 678 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 CCDC122Q5T0U0 273 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ATXN7L2Q5T6C5 722 aaPredicted RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 DBX2Q6ZNG2 339 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 RFX8Q6ZV50 586 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 PARS2Q7L3T8 475 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 VPS36Q86VN1 386 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ARHGAP12Q8IWW6 846 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 OR2AP1Q8NGE2 309 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 CELF6Q96J87 481 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 SERAC1Q96JX3 654 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 EIF3CQ99613 913 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 SLC39A8Q9C0K1 460 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ZDHHC6Q9H6R6 413 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 TM7SF3Q9NS93 570 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 CWC15Q9P013 229 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 TPX2Q9ULW0 747 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 HPCAL4Q9UM19 191 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 ZFR2Q9UPR6 939 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 WASF3Q9UPY6 502 aa18.14■□□□□ 0.49
SBDSP1-202ENST00000423945 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 SPAARA0A1B0GVQ0 90 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 ZSCAN5CA6NGD5 496 aaPredicted RBP18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 J3KR12 359 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 RNGTTO60942 597 aaKnown RBP18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 CBFA2T3O75081 653 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 TPM3P06753 285 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 ITGB7P26010 798 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 NDST2P52849 883 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 DPYSQ14117 519 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 ACAP1Q15027 740 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 CYTH1Q15438 398 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 PPP6R3Q5H9R7 873 aaPredicted RBP18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 AFMIDQ63HM1 303 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 NAPEPLDQ6IQ20 393 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 CPNE8Q86YQ8 564 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 PSTKQ8IV42 348 aaKnown RBP18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 NAXDQ8IW45 347 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 TP53INP2Q8IXH6 220 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 NPWQ8N729 165 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 NIPA2Q8N8Q9 360 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 NUP85Q9BW27 656 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 PACSIN1Q9BY11 444 aa18.13■□□□□ 0.49
SBDSP1-202ENST00000423945 SLC32A1Q9H598 525 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms