RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 CARD16Q5EG05 197 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 MANEALQ5VSG8 457 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 RWDD4Q6NW29 188 aaKnown RBP18.84■□□□□ 0.61
SREBF1-206ENST00000423161 FBXL19Q6PCT2 694 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 TRIM72Q6ZMU5 477 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 GCNT7Q6ZNI0 430 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 PDZD3Q86UT5 571 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 JOSD2Q8TAC2 188 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 GPT2Q8TD30 523 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 TM6SF2Q9BZW4 377 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 SCUBE2Q9NQ36 999 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 LMBRD1Q9NUN5 540 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 KLHL11Q9NVR0 708 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 ACTL7AQ9Y615 435 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 CELSR3Q9NYQ7 3312 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 LAMA5O15230 3695 aa18.84■□□□□ 0.61
SREBF1-206ENST00000423161 C2CD4BA6NLJ0 364 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 SIGLEC6O43699 453 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 GJB6O95452 261 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 ADRB3P13945 408 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 DGKAP23743 735 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 L1CAMP32004 1257 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 PTPN9P43378 593 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 MAPKAPK2P49137 400 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-206ENST00000423161 PROX2Q3B8N5 592 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 HS1BP3Q53T59 392 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 STRADAQ7RTN6 431 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 SLC25A45Q8N413 288 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 OSBPL2Q9H1P3 480 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 ZDHHC6Q9H6R6 413 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 NDFIP2Q9NV92 336 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 DAAM1Q9Y4D1 1078 aa18.83■□□□□ 0.6
SREBF1-206ENST00000423161 A6NNZ2 444 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 FAM72CH0Y354 149 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 TRIM38O00635 465 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 CD160O95971 181 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 RHOQP17081 205 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 ACP1P24666 158 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 STAT1P42224 750 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 TARDBPQ13148 414 aaKnown RBP eCLIP18.82■□□□□ 0.65e-7■■■■□ 20.7
SREBF1-206ENST00000423161 ZNF211Q13398 564 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-206ENST00000423161 FAM72AQ5TYM5 149 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 FAM72DQ6L9T8 149 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 KIAA1161Q6NSJ0 714 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 PARS2Q7L3T8 475 aaKnown RBP18.82■□□□□ 0.6
SREBF1-206ENST00000423161 PTAR1Q7Z6K3 402 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-206ENST00000423161 ABI3BPQ7Z7G0 1075 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 NLRP14Q86W24 1093 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 FAM72BQ86X60 149 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 ARHGEF2Q92974 986 aaKnown RBP18.82■□□□□ 0.6
SREBF1-206ENST00000423161 ISG20Q96AZ6 181 aaKnown RBP18.82■□□□□ 0.6
SREBF1-206ENST00000423161 TBC1D31Q96DN5 1066 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 RETREG1Q9H6L5 497 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 FANCLQ9NW38 375 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 TMEM248Q9NWD8 314 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 UCKL1Q9NWZ5 548 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 HECAQ9UBI9 543 aaPredicted RBP18.82■□□□□ 0.6
SREBF1-206ENST00000423161 DNAI1Q9UI46 699 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 NEU3Q9UQ49 428 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 SIK3Q9Y2K2 1263 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 FADS3Q9Y5Q0 445 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 IGSF10Q6WRI0 2623 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 BAHCC1Q9P281 2608 aa18.82■□□□□ 0.6
SREBF1-206ENST00000423161 CXorf51AA0A1B0GTR3 108 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 FFAR2O15552 330 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 PIAS2O75928 621 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 LRIG2O94898 1065 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 KRT3P12035 628 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 UNGP13051 313 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-206ENST00000423161 NSFP46459 744 aaKnown RBP18.81■□□□□ 0.6
SREBF1-206ENST00000423161 GEMIN4P57678 1058 aaKnown RBP18.81■□□□□ 0.6
SREBF1-206ENST00000423161 RPS21P63220 83 aaKnown RBP18.81■□□□□ 0.6
SREBF1-206ENST00000423161 DAB2P98082 770 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 PTP4A2Q12974 167 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 CLEC17AQ6ZS10 378 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 SLC22A18ASQ8N1D0 253 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 RYBPQ8N488 228 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-206ENST00000423161 CCDC185Q8N715 623 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 OR6K2Q8NGY2 324 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 OR4C6Q8NH72 309 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 FAM174AQ8TBP5 190 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 FAM172AQ8WUF8 416 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 FEM1CQ96JP0 617 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 PCMTD1Q96MG8 357 aaPredicted RBP18.81■□□□□ 0.6
SREBF1-206ENST00000423161 PCDHB18PQ96TA0 734 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 SLC17A9Q9BYT1 436 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 MAGEB5Q9BZ81 275 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 MAGEH1Q9H213 219 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 ADAM22Q9P0K1 906 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 HPCAL4Q9UM19 191 aa18.81■□□□□ 0.6
SREBF1-206ENST00000423161 LRRK1Q38SD2 2015 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 A0A087WV48 116 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 AP1G1O43747 822 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 PLEKP08567 350 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 COPB1P53618 953 aaKnown RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 HDAC4P56524 1084 aa18.8■□□□□ 0.6
SREBF1-206ENST00000423161 GSCP56915 257 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 COL9A2Q14055 689 aaPredicted RBP18.8■□□□□ 0.6
SREBF1-206ENST00000423161 FGL2Q14314 439 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms