RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 IFI35P80217 286 aaPredicted RBP17.83■□□□□ 0.44
LINC00271-201ENST00000421378 CYTH1Q15438 398 aa17.83■□□□□ 0.44
LINC00271-201ENST00000421378 CRY1Q16526 586 aa17.83■□□□□ 0.44
LINC00271-201ENST00000421378 TEX26Q8N6G2 289 aa17.83■□□□□ 0.44
LINC00271-201ENST00000421378 NKD2Q969F2 451 aaPredicted RBP17.83■□□□□ 0.44
LINC00271-201ENST00000421378 EXOC2Q96KP1 924 aa17.83■□□□□ 0.44
LINC00271-201ENST00000421378 C10orf88Q9H8K7 445 aa17.83■□□□□ 0.44
LINC00271-201ENST00000421378 HAUS2Q9NVX0 235 aa17.83■□□□□ 0.44
LINC00271-201ENST00000421378 CKAP5Q14008 2032 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 A0A1W2PQF6 199 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 BCLAF3A2AJT9 711 aaKnown RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 TARSL2A2RTX5 802 aaKnown RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 FAM86C2PA6NEL3 165 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 ZNF500O60304 480 aaPredicted RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 SIN3BO75182 1162 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 JCHAINP01591 159 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 HSPA9P38646 679 aaKnown RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 SNRPD1P62314 119 aaKnown RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 ZBTB17Q13105 803 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 CAMK2GQ13555 558 aaPredicted RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 SNX1Q13596 522 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 ELAVL3Q14576 367 aaKnown RBP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 C9orf64Q5T6V5 341 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 KIAA1211LQ6NV74 962 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 PRELID2Q8N945 189 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 OR2AP1Q8NGE2 309 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 OR2A12Q8NGT7 310 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 ERLEC1Q96DZ1 483 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 GDAP1L1Q96MZ0 367 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 TMEM121Q9BTD3 319 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 CEP41Q9BYV8 373 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 PRSS16Q9NQE7 514 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 RBM22Q9NW64 420 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC00271-201ENST00000421378 LHX3Q9UBR4 397 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 AMACRQ9UHK6 382 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 TTLL3Q9Y4R7 772 aa17.82■□□□□ 0.44
LINC00271-201ENST00000421378 RNF103O00237 685 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 KCNN4O15554 427 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 URI1O94763 535 aaPredicted RBP17.81■□□□□ 0.44
LINC00271-201ENST00000421378 IGSF6O95976 241 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 GSRP00390 522 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 PTPN3P26045 913 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 DGKEP52429 567 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 OASLQ15646 514 aaKnown RBP17.81■□□□□ 0.44
LINC00271-201ENST00000421378 CARD16Q5EG05 197 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 DRICH1Q6PGQ1 229 aaPredicted RBP17.81■□□□□ 0.44
LINC00271-201ENST00000421378 TMEM92Q6UXU6 159 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 TMEM105Q8N8V8 129 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 VAT1Q99536 393 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 IL12RB2Q99665 862 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 MGME1Q9BQP7 344 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 NT5MQ9NPB1 228 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 C11orf16Q9NQ32 467 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 POLR3BQ9NW08 1133 aaPredicted RBP17.81■□□□□ 0.44
LINC00271-201ENST00000421378 C2orf42Q9NWW7 574 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 ZNF148Q9UQR1 794 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 FARP1Q9Y4F1 1045 aaPredicted RBP17.81■□□□□ 0.44
LINC00271-201ENST00000421378 ZDBF2Q9HCK1 2354 aa17.81■□□□□ 0.44
LINC00271-201ENST00000421378 CFAP69A5D8W1 941 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 MUSKO15146 869 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 STK10O94804 968 aaKnown RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 HLA-DQB2P05538 268 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 COL9A1P20849 921 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 CCR3P51677 355 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 CCNHP51946 323 aaPredicted RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 WASHC5Q12768 1159 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 TEX44Q53QW1 395 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 ATXN7L2Q5T6C5 722 aaPredicted RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 DPY19L3Q6ZPD9 716 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 PLPP6Q8IY26 295 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 PGBD5Q8N414 524 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 RYBPQ8N488 228 aaPredicted RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 AGAP3Q96P47 875 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 POLR1EQ9GZS1 481 aaKnown RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 FBRSQ9HAH7 460 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 CD248Q9HCU0 757 aa17.8■□□□□ 0.44
LINC00271-201ENST00000421378 POLMQ9NP87 494 aaPredicted RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 SPATA6Q9NWH7 488 aaPredicted RBP17.8■□□□□ 0.44
LINC00271-201ENST00000421378 TCRBV21S2A2A0A5A6 115 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 PDE2AO00408 941 aaPredicted RBP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 ITGAVP06756 1048 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 RGRP47804 291 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 MAXP61244 160 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 NSUN2Q08J23 767 aaKnown RBP eCLIP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 CYP1B1Q16678 543 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 MAMSTRQ6ZN01 415 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 STK40Q8N2I9 435 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 CNTD1Q8N815 330 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 FAM71DQ8N9W8 422 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 C12orf50Q8NA57 414 aaPredicted RBP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 OR6K2Q8NGY2 324 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 OR2T3Q8NH03 318 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 OR8D1Q8WZ84 308 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 MAGOHBQ96A72 148 aaKnown RBP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 USP29Q9HBJ7 922 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 KLHL8Q9P2G9 620 aaPredicted RBP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 CDC23Q9UJX2 597 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 PRR33A8MZF0 331 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 ALOX15BO15296 676 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 PHF2O75151 1096 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms