RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 CARD16Q5EG05 197 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 ZNF776Q68DI1 518 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 PCDH20Q8N6Y1 951 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 TSEN2Q8NCE0 465 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 TRIM58Q8NG06 486 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 ATOH1Q92858 354 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 VOPP1Q96AW1 172 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 FAM118BQ9BPY3 351 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 ZDHHC6Q9H6R6 413 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 SERGEFQ9UGK8 458 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 CYP8B1Q9UNU6 501 aa12.89□□□□□ -0.35
AC004540.1-205ENST00000420774 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 CXorf51AA0A1B0GTR3 108 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 ENC1O14682 589 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 MCF2LO15068 1137 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 LILRB5O75023 590 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 CHRNA3P32297 505 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 PTPN7P35236 360 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 TPMTP51580 245 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 COPS2P61201 443 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 MAXP61244 160 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 TFDP2Q14188 446 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 RPS6KA1Q15418 735 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 BBS12Q6ZW61 710 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 FAM124AQ86V42 546 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 SLC35F6Q8N357 371 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 AADATQ8N5Z0 425 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 CCNYQ8ND76 341 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 OR2AP1Q8NGE2 309 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 OR8D1Q8WZ84 308 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 ISG20Q96AZ6 181 aaKnown RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 HDAC11Q96DB2 347 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 NSMCE3Q96MG7 304 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 CINPQ9BW66 212 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 HECAQ9UBI9 543 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 IL36AQ9UHA7 158 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 MBD1Q9UIS9 605 aaPredicted RBP12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 PCDHGA2Q9Y5H1 932 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 WASF2Q9Y6W5 498 aa12.88□□□□□ -0.35
AC004540.1-205ENST00000420774 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 SDK1Q7Z5N4 2213 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 IGHV1OR15-9A0A0B4J2B8 117 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 A0A1W2PP55 124 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 KCNK1O00180 336 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 KRIT1O00522 736 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 KCNK3O14649 394 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 RNASEH1O60930 286 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 LEFTY1O75610 366 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 RPP40O75818 363 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 GSRP00390 522 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 DNTTP04053 509 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 ACADMP11310 421 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 TGM2P21980 687 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 SLC8A1P32418 973 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 P2RY2P41231 377 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 SNRPD1P62314 119 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 PPIDQ08752 370 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 AP1B1Q10567 949 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 LPAL2Q16609 132 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 ZC3H18Q86VM9 953 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 P3H4Q92791 437 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 ARRDC3Q96B67 414 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 HEPHQ9BQS7 1158 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 CEP41Q9BYV8 373 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 PABPC3Q9H361 631 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 FBRSQ9HAH7 460 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 ITM2CQ9NQX7 267 aa12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
AC004540.1-205ENST00000420774 KPNA3O00505 521 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 MATN3O15232 486 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 ALOX15BO15296 676 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms