RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TMEM131Q92545 1883 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 A0A1W2PR77 199 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 FAM47DPA6NHR8 397 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 LRRC72A6NJI9 287 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 C1QTNF3-AMACRE9PGA6 284 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 EEF2KO00418 725 aaKnown RBP20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 GIPC1O14908 333 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 SPINT1O43278 529 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 PRPSAP2O60256 369 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 KCNK5O95279 499 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 ERCC2P18074 760 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 GKP32189 559 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 NDST2P52849 883 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 PIGHQ14442 188 aaPredicted RBP20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 CYTH1Q15438 398 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 GAS2L3Q86XJ1 694 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 TP53INP2Q8IXH6 220 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 NETO2Q8NC67 525 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 FAM71BQ8TC56 605 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 SNX19Q92543 992 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 TSC1Q92574 1164 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 SLC6A18Q96N87 628 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 GTPBP2Q9BX10 602 aaKnown RBP20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 HDAC8Q9BY41 377 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 SLC39A8Q9C0K1 460 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 RBSNQ9H1K0 784 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 LHX3Q9UBR4 397 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 ANAPC7Q9UJX3 599 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 MFHAS1Q9Y4C4 1052 aa20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 TP53BP1Q12888 1972 aaPredicted RBP20.99■□□□□ 0.95
PKNOX1-202ENST00000418336 A0A1B0GVT2 93 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 TMCC1O94876 653 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 GSRP00390 522 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 PRNPP04156 253 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 RARAP10276 462 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 GRIA4P48058 902 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 ARSEP51690 589 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 AFF3P51826 1226 aaKnown RBP20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 KIF19Q2TAC6 998 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 SMTNL2Q2TAL5 461 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 INO80DQ53TQ3 878 aaPredicted RBP20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 POLNQ7Z5Q5 900 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 TRIM69Q86WT6 500 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 GRIN3AQ8TCU5 1115 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 HEPHQ9BQS7 1158 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 TM6SF2Q9BZW4 377 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 ZDHHC5Q9C0B5 715 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 ETNK2Q9NVF9 386 aa20.98■□□□□ 0.95
PKNOX1-202ENST00000418336 ZSCAN5CA6NGD5 496 aaPredicted RBP20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 PCNX2A6NKB5 2137 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 J3KR12 359 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 SYPP08247 313 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 ADRB1P08588 477 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 CSRP1P21291 193 aaKnown RBP20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 IL4RP24394 825 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 DBX2Q6ZNG2 339 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 ARHGAP36Q6ZRI8 547 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 TC2NQ8N9U0 490 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 OR2AP1Q8NGE2 309 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 OR6K2Q8NGY2 324 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 TEKT4Q8WW24 435 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 CELF6Q96J87 481 aaKnown RBP20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 CCDC114Q96M63 670 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 NCAPGQ9BPX3 1015 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 HECAQ9UBI9 543 aaPredicted RBP20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 ZFR2Q9UPR6 939 aaKnown RBP20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 FNDC3AQ9Y2H6 1198 aaKnown RBP20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 SNX11Q9Y5W9 270 aa20.97■□□□□ 0.95
PKNOX1-202ENST00000418336 KPNA3O00505 521 aaPredicted RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 BUB1O43683 1085 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 PRAMEF11O60813 436 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 DESP17661 470 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 ITGB7P26010 798 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 CTSKP43235 329 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 PAPOLAP51003 745 aaKnown RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 GEMIN4P57678 1058 aaKnown RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 RACK1P63244 317 aaKnown RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 UAP1L1Q3KQV9 507 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 BOLA3Q53S33 107 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 PPP6R3Q5H9R7 873 aaPredicted RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 ATXN7L2Q5T6C5 722 aaPredicted RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 ERN2Q76MJ5 926 aaKnown RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 PARS2Q7L3T8 475 aaKnown RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 ZNF564Q8TBZ8 553 aaPredicted RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 CASKIN2Q8WXE0 1202 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 NHEJ1Q9H9Q4 299 aaPredicted RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 PCDH18Q9HCL0 1135 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 PREBQ9HCU5 417 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 IP6K2Q9UHH9 426 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 TPX2Q9ULW0 747 aaKnown RBP20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 ANKRD6Q9Y2G4 727 aa20.96■□□□□ 0.95
PKNOX1-202ENST00000418336 TBC1D3DA0A087WVF3 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3IA0A087WXS9 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3EA0A087X179 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3KA0A087X1G2 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3FA6NER0 549 aaPredicted RBP20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3LB9A6J9 549 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 VILLO15195 856 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 PEX11BO96011 259 aa20.95■□□□□ 0.94
PKNOX1-202ENST00000418336 TBC1D3HP0C7X1 549 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms