RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 EIF3CQ99613 913 aaKnown RBP16.7■□□□□ 0.26
DDR1-231ENST00000417521 NCAPGQ9BPX3 1015 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 TRIM7Q9C029 511 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 TNKS2Q9H2K2 1166 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 GAREM1Q9H706 876 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 CATSPERBQ9H7T0 1116 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 EBF2Q9HAK2 575 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
DDR1-231ENST00000417521 GIPC1O14908 333 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 FGF10O15520 208 aaPredicted RBP16.69■□□□□ 0.26
DDR1-231ENST00000417521 LATO43561 262 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 KDELR3O43731 214 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 ZNF883P0CG24 379 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 YBEYP58557 167 aaPredicted RBP16.69■□□□□ 0.26
DDR1-231ENST00000417521 HLA-BQ31612 363 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 CARD16Q5EG05 197 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 AGBL4Q5VU57 503 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 ARFGAP1Q8N6T3 406 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 CHST14Q8NCH0 376 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 DEFB124Q8NES8 71 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 IL36AQ9UHA7 158 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 ANKRD6Q9Y2G4 727 aa16.69■□□□□ 0.26
DDR1-231ENST00000417521 REXO2Q9Y3B8 237 aaKnown RBP16.69■□□□□ 0.26
DDR1-231ENST00000417521 TNRC6BQ9UPQ9 1833 aaKnown RBP16.69■□□□□ 0.26
DDR1-231ENST00000417521 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 PLK4O00444 970 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 KPNA3O00505 521 aaPredicted RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 VILLO15195 856 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 CYP1A2P05177 515 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 PTMAP06454 111 aaKnown RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 TMEM253P0C7T8 217 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 NUDT1P36639 197 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 MAGEA1P43355 309 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 ZNF252P-AS1Q0IIN9 211 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 HNRNPDQ14103 355 aaKnown RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 ACAP1Q15027 740 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 SPA17Q15506 151 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 KIF19Q2TAC6 998 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 ERMARDQ5T6L9 678 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 PSTKQ8IV42 348 aaKnown RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 UMODL1-AS1Q8N2C9 162 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 ACRBPQ8NEB7 543 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 CTNNBL1Q8WYA6 563 aaPredicted RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 PPP1R16AQ96I34 528 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 HEPHQ9BQS7 1158 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 NOL6Q9H6R4 1146 aaKnown RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 PREBQ9HCU5 417 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 DYRK4Q9NR20 520 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 AP4E1Q9UPM8 1137 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 FCF1Q9Y324 198 aaKnown RBP16.68■□□□□ 0.26
DDR1-231ENST00000417521 PCDHA13Q9Y5I0 950 aa16.68■□□□□ 0.26
DDR1-231ENST00000417521 PRPSAP2O60256 369 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 LEFTY1O75610 366 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PMLP29590 882 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 DNA2P51530 1060 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CCZ1BP86790 482 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CCZ1P86791 482 aaPredicted RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 PARP15Q460N3 678 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 ARSIQ5FYB1 569 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PIP5KL1Q5T9C9 394 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 NEK5Q6P3R8 708 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 ADAT2Q7Z6V5 191 aaKnown RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 PRPF39Q86UA1 669 aaKnown RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 TRIM69Q86WT6 500 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CASKIN2Q8WXE0 1202 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 ARRDC3Q96B67 414 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 HDAC8Q9BY41 377 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 IL21RQ9HBE5 538 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 TM7SF3Q9NS93 570 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PCSK1NQ9UHG2 260 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PCDHGB2Q9Y5G2 931 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 SNX11Q9Y5W9 270 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 ACTL7AQ9Y615 435 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 WASF2Q9Y6W5 498 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 LRCH4O75427 683 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CD38P28907 300 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 MIPP30301 263 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PCK1P35558 622 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CTSKP43235 329 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 CCNHP51946 323 aaPredicted RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 ZNF135P52742 658 aaPredicted RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 C21orf59P57076 290 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 TAS2R38P59533 333 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 TPI1P60174 286 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PPP2CBP62714 309 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 PPP2CAP67775 309 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 INO80DQ53TQ3 878 aaPredicted RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 DBX2Q6ZNG2 339 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 ERN2Q76MJ5 926 aaKnown RBP16.67■□□□□ 0.26
DDR1-231ENST00000417521 GRIN3AQ8TCU5 1115 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 LRIG1Q96JA1 1093 aa16.67■□□□□ 0.26
DDR1-231ENST00000417521 SERAC1Q96JX3 654 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms