RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 FOXR1Q6PIV2 292 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 LEKR1Q6ZMV7 388 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 Q6ZSR6 202 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 PTAR1Q7Z6K3 402 aaPredicted RBP7.13□□□□□ -1.27
COPS3-202ENST00000417352 FAM131BQ86XD5 332 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 SPATS2Q86XZ4 545 aaKnown RBP7.13□□□□□ -1.27
COPS3-202ENST00000417352 ZDHHC17Q8IUH5 632 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 PAF1Q8N7H5 531 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 CHST14Q8NCH0 376 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 OR7D4Q8NG98 312 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 SHC3Q92529 594 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 PPP1R16AQ96I34 528 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 FEM1CQ96JP0 617 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 CFAP57Q96MR6 1250 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 TBCBQ99426 244 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 TUBGCP2Q9BSJ2 902 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 KDM4CQ9H3R0 1056 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 NDST4Q9H3R1 872 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 SYNDIG1Q9H7V2 258 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 ERVMER34-1Q9H9K5 563 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 PREBQ9HCU5 417 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 ASNSD1Q9NWL6 643 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 UCKL1Q9NWZ5 548 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 ARHGAP20Q9P2F6 1191 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 VPS51Q9UID3 782 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 AJAP1Q9UKB5 411 aaPredicted RBP7.13□□□□□ -1.27
COPS3-202ENST00000417352 TPX2Q9ULW0 747 aaKnown RBP7.13□□□□□ -1.27
COPS3-202ENST00000417352 HPCAL4Q9UM19 191 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 CLCA2Q9UQC9 943 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 DMTF1Q9Y222 760 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 SHROOM3Q8TF72 1996 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 WDFY3Q8IZQ1 3526 aa7.13□□□□□ -1.27
COPS3-202ENST00000417352 ZFYVE26Q68DK2 2539 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ITPR1Q14643 2758 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 CPED1A4D0V7 1026 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 NEMP2A6NFY4 417 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 KRIT1O00522 736 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 TRIM38O00635 465 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ALOX15BO15296 676 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 LATO43561 262 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 NEBLO76041 1014 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 GFPT2O94808 682 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 PAK4O96013 591 aaPredicted RBP7.12□□□□□ -1.27
COPS3-202ENST00000417352 CAPNS1P04632 268 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 CTSLP07711 333 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ALPPL2P10696 532 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 CYP11B1P15538 503 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 TIMP2P16035 220 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ITPKBP27987 946 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 NUDT1P36639 197 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 CXCR3P49682 368 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ACADVLP49748 655 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 WDR4P57081 412 aaKnown RBP7.12□□□□□ -1.27
COPS3-202ENST00000417352 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 OVGP1Q12889 678 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 SYCP1Q15431 976 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 TCEA2Q15560 299 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ARL13BQ3SXY8 428 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 SLC25A52Q3SY17 297 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 SOWAHCQ53LP3 525 aaPredicted RBP7.12□□□□□ -1.27
COPS3-202ENST00000417352 BRMS1LQ5PSV4 323 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 PIP5KL1Q5T9C9 394 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 NAA35Q5VZE5 725 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 SEL1L3Q68CR1 1132 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 FOXR2Q6PJQ5 311 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 DPY19L3Q6ZPD9 716 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ERN2Q76MJ5 926 aaKnown RBP7.12□□□□□ -1.27
COPS3-202ENST00000417352 SLC26A9Q7LBE3 791 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 SETD3Q86TU7 594 aaPredicted RBP7.12□□□□□ -1.27
COPS3-202ENST00000417352 TRIM69Q86WT6 500 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 HORMAD1Q86X24 394 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 EMC1Q8N766 993 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 TMIEQ8NEW7 156 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 OR13H1Q8NG92 308 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 OR2A12Q8NGT7 310 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 OR6K2Q8NGY2 324 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ARRDC3Q96B67 414 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ALG14Q96F25 216 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 NPY6RQ99463 290 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 TM6SF2Q9BZW4 377 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ZYG11BQ9C0D3 744 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 VPS16Q9H269 839 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 RRN3Q9NYV6 651 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 HECAQ9UBI9 543 aaPredicted RBP7.12□□□□□ -1.27
COPS3-202ENST00000417352 DNAI1Q9UI46 699 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 TBC1D30Q9Y2I9 924 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 PCDHGA1Q9Y5H4 931 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 FHOD1Q9Y613 1164 aa7.12□□□□□ -1.27
COPS3-202ENST00000417352 ATRXP46100 2492 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 GTPBP10A4D1E9 387 aaKnown RBP7.11□□□□□ -1.27
COPS3-202ENST00000417352 A6NNZ2 444 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 FPGTO14772 594 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 BRINP1O60477 761 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 DKK1O94907 266 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 MT-CO3P00414 261 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 MPOP05164 745 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 MMEP08473 750 aa7.11□□□□□ -1.27
COPS3-202ENST00000417352 HNRNPA2B1P22626 353 aaKnown RBP7.11□□□□□ -1.27
COPS3-202ENST00000417352 XPAP23025 273 aaPredicted RBP7.11□□□□□ -1.27
COPS3-202ENST00000417352 DGKAP23743 735 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms