RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 GJB6O95452 261 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 GPD1P21695 349 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 HDAC4P56524 1084 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 ARF5P84085 180 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 ZNF284Q2VY69 593 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 RAB6CQ53S08 254 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 WDR59Q6PJI9 974 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 MON1BQ7L1V2 547 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 NLRP14Q86W24 1093 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 EID2Q8N6I1 236 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 TMEM145Q8NBT3 493 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 GRIN3AQ8TCU5 1115 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 TBC1D31Q96DN5 1066 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 FEM1CQ96JP0 617 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 CNDP2Q96KP4 475 aaKnown RBP25.82■■□□□ 1.72
VEGFA-208ENST00000417285 RAB6CQ9H0N0 254 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 ZFYVE26Q68DK2 2539 aa25.82■■□□□ 1.72
VEGFA-208ENST00000417285 LRIG2O94898 1065 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 ITGB7P26010 798 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 AKT2P31751 481 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 L1CAMP32004 1257 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 ZNF165P49910 485 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 NEK3P51956 506 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 BNIP3Q12983 259 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 DNAJC24Q6P3W2 148 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 SLFN11Q7Z7L1 901 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 TMPRSS12Q86WS5 348 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 ARHGEF2Q92974 986 aaKnown RBP25.81■■□□□ 1.72
VEGFA-208ENST00000417285 LRIG1Q96JA1 1093 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 KNTC1P50748 2209 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 TMEM131Q92545 1883 aa25.81■■□□□ 1.72
VEGFA-208ENST00000417285 FAM72CH0Y354 149 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 TAF4O00268 1085 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 HNRNPA2B1P22626 353 aaKnown RBP25.8■■□□□ 1.72
VEGFA-208ENST00000417285 ACVRL1P37023 503 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 CCDC157Q569K6 752 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 FAM72AQ5TYM5 149 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 SFMBT2Q5VUG0 894 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 FAM72DQ6L9T8 149 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 FBXL19Q6PCT2 694 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 ZSCAN30Q86W11 494 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 FAM72BQ86X60 149 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 KLHL11Q9NVR0 708 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 DNAI1Q9UI46 699 aa25.8■■□□□ 1.72
VEGFA-208ENST00000417285 RAMP2O60895 175 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 CD160O95971 181 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 CCNHP51946 323 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 ZNF143P52747 638 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 RPS21P63220 83 aaKnown RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 POLD3Q15054 466 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 KIAA1161Q6NSJ0 714 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 PPP1R2P3Q6NXS1 205 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 DCP2Q8IU60 420 aaKnown RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 CCDC185Q8N715 623 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 NDFIP2Q9NV92 336 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 DKK4Q9UBT3 224 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 FCF1Q9Y324 198 aaKnown RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 HS3ST3A1Q9Y663 406 aa25.79■■□□□ 1.72
VEGFA-208ENST00000417285 GOLGA4Q13439 2230 aaKnown RBP25.79■■□□□ 1.72
VEGFA-208ENST00000417285 DOCK4Q8N1I0 1966 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 ITPR1Q14643 2758 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 ZSCAN5CA6NGD5 496 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-208ENST00000417285 RNF103O00237 685 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 AP1G1O43747 822 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 THEGLP0DJG4 465 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 ADRB3P13945 408 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 PRLRP16471 622 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 DESP17661 470 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 TNFAIP3P21580 790 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 AIF1P55008 147 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 ILKQ13418 452 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 TMEM259Q4ZIN3 620 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 ACAD10Q6JQN1 1059 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 DHRS13Q6UX07 377 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 KANSL1Q7Z3B3 1105 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 IRF2BP2Q7Z5L9 587 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 PDCD7Q8N8D1 485 aaKnown RBP25.78■■□□□ 1.72
VEGFA-208ENST00000417285 BAP1Q92560 729 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 TSC1Q92574 1164 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 KLK6Q92876 244 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 RAB7BQ96AH8 199 aa25.78■■□□□ 1.72
VEGFA-208ENST00000417285 ZFHX4Q86UP3 3567 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 KDELR3O43731 214 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 RFPL3O75679 317 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 POP4O95707 220 aaKnown RBP25.77■■□□□ 1.72
VEGFA-208ENST00000417285 GSRP00390 522 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 SNRPD1P62314 119 aaKnown RBP25.77■■□□□ 1.72
VEGFA-208ENST00000417285 EFHC2Q5JST6 749 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 RYBPQ8N488 228 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-208ENST00000417285 VCPIP1Q96JH7 1222 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 MCEEQ96PE7 176 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 CNPY3Q9BT09 278 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 SLC17A9Q9BYT1 436 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 MAGEB5Q9BZ81 275 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 ZFR2Q9UPR6 939 aaKnown RBP25.77■■□□□ 1.72
VEGFA-208ENST00000417285 CA5BQ9Y2D0 317 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 FADS3Q9Y5Q0 445 aa25.77■■□□□ 1.72
VEGFA-208ENST00000417285 ACACAQ13085 2346 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 A0A1W2PQC6 194 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 TCRBV5S1A1TA0A578 114 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms