RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 HECAQ9UBI9 543 aaPredicted RBP23.49■■□□□ 1.35
SMARCB1-205ENST00000417137 MBD1Q9UIS9 605 aaPredicted RBP23.49■■□□□ 1.35
SMARCB1-205ENST00000417137 A0A0U1RQJ8 604 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 POP4O95707 220 aaKnown RBP23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 CTNNA2P26232 953 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 CETN2P41208 172 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 RPL6Q02878 288 aaKnown RBP23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 LPAL2Q16609 132 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 MFSD7Q6UXD7 560 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 BBS5Q8N3I7 341 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 FRMD1Q8N878 549 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 TOE1Q96GM8 510 aaKnown RBP23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 LRIG1Q96JA1 1093 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 GDAP1L1Q96MZ0 367 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 BTBD1Q9H0C5 482 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 SGK2Q9HBY8 427 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 DYRK4Q9NR20 520 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 GMEB2Q9UKD1 530 aa23.48■■□□□ 1.35
SMARCB1-205ENST00000417137 MIF4GDA9UHW6 222 aaKnown RBP23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 RNASEH2AO75792 299 aaKnown RBP23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 IGSF6O95976 241 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 BCKDHBP21953 392 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 CDKN2BP42772 138 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 RENBPP51606 427 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 CCNHP51946 323 aaPredicted RBP23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 RWDD2BP57060 319 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 COPS2P61201 443 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 GALNT2Q10471 571 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 CYTH1Q15438 398 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 MYLK3Q32MK0 819 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 ARSIQ5FYB1 569 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 TFDP3Q5H9I0 405 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 PMS2CLQ68D20 193 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 SLC9A4Q6AI14 798 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 SPOCD1Q6ZMY3 1216 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 ARHGAP36Q6ZRI8 547 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 NT5DC3Q86UY8 548 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 FAM124AQ86V42 546 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 CCDC50Q8IVM0 306 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 TP53INP2Q8IXH6 220 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 HDDC3Q8N4P3 179 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 UBL4BQ8N7F7 174 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 PPP1R16AQ96I34 528 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 CINPQ9BW66 212 aaPredicted RBP23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 FZD4Q9ULV1 537 aa23.47■■□□□ 1.35
SMARCB1-205ENST00000417137 A0A1W2PP55 124 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 MFSD11O43934 449 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 MAFKO60675 156 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 GARSP41250 739 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 LBRQ14739 615 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 TAZQ16635 292 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 TIGD7Q6NT04 549 aaPredicted RBP23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 BZW1Q7L1Q6 419 aaKnown RBP23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 CHST14Q8NCH0 376 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 KRT35Q92764 455 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 FOXJ1Q92949 421 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 CD93Q9NPY3 652 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 LZTFL1Q9NQ48 299 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 NCDNQ9UBB6 729 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 SEPT3Q9UH03 358 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 SARDHQ9UL12 918 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 PPP2R2CQ9Y2T4 447 aa23.46■■□□□ 1.35
SMARCB1-205ENST00000417137 FANCMQ8IYD8 2048 aa23.45■■□□□ 1.35
SMARCB1-205ENST00000417137 CHD5Q8TDI0 1954 aa23.45■■□□□ 1.35
SMARCB1-205ENST00000417137 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 PRR23AA6NEV1 266 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 KPNA3O00505 521 aaPredicted RBP23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 KRIT1O00522 736 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 LEFTY1O75610 366 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 RETP07949 1114 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 CCNCP24863 283 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 FOXK2Q01167 660 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 GRM3Q14832 879 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 TMEFF1Q8IYR6 380 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 PLD5Q8N7P1 536 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 CADM4Q8NFZ8 388 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 GRIN3AQ8TCU5 1115 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 GPR174Q9BXC1 333 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 OSBPL1AQ9BXW6 950 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 PCED1AQ9H1Q7 454 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 NEUROG2Q9H2A3 272 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 ZDHHC6Q9H6R6 413 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 HAUS2Q9NVX0 235 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 HEY1Q9Y5J3 304 aa23.45■■□□□ 1.34
SMARCB1-205ENST00000417137 SLC7A4O43246 635 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 CTSLP07711 333 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 HSPA9P38646 679 aaKnown RBP23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 CSNK1DP48730 415 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 MARCKSL1P49006 195 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 NR2C2P49116 596 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 DHPSP49366 369 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 PEX5P50542 639 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 GBE1Q04446 702 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 NSUN2Q08J23 767 aaKnown RBP eCLIP23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 PPP2R5EQ16537 467 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 ATXN7L2Q5T6C5 722 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 MARC1Q5VT66 337 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 KAZNQ674X7 775 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 AADATQ8N5Z0 425 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms