RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 KDM7AQ6ZMT4 941 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 LRRC69Q6ZNQ3 347 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 ARCQ7LC44 396 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 TMC6Q7Z403 805 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 DCP2Q8IU60 420 aaKnown RBP15.11■□□□□ 0.01
RPS28-201ENST00000417088 DRC7Q8IY82 874 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 PCDH20Q8N6Y1 951 aaKnown RBP15.11■□□□□ 0.01
RPS28-201ENST00000417088 FGF11Q92914 225 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 IFT43Q96FT9 208 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 HEPHQ9BQS7 1158 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 SLC17A9Q9BYT1 436 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 CLSTN2Q9H4D0 955 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 PRORYQ9H606 182 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 GPR27Q9NS67 375 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 PPARGC1AQ9UBK2 798 aaKnown RBP15.11■□□□□ 0.01
RPS28-201ENST00000417088 FCF1Q9Y324 198 aaKnown RBP15.11■□□□□ 0.01
RPS28-201ENST00000417088 RAI2Q9Y5P3 530 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 FADS3Q9Y5Q0 445 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 ACTL7AQ9Y615 435 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 HS3ST3A1Q9Y663 406 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 DOCK4Q8N1I0 1966 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 TRPM6Q9BX84 2022 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 POM121BA6NF01 834 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 EIF4E1BA6NMX2 242 aaKnown RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 RAD51BO15315 384 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 RRP8O43159 456 aaKnown RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 CD160O95971 181 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 PAK4O96013 591 aaPredicted RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 MYF5P13349 255 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 ITGB7P26010 798 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 CCNHP51946 323 aaPredicted RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 RPS21P63220 83 aaKnown RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 ATP11AP98196 1134 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 RAB6CQ53S08 254 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 NAA35Q5VZE5 725 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 KIAA1161Q6NSJ0 714 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 PARS2Q7L3T8 475 aaKnown RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 EMC1Q8N766 993 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 MSANTD4Q8NCY6 345 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 FAM174AQ8TBP5 190 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 BAP1Q92560 729 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 FEM1CQ96JP0 617 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 UBL7Q96S82 380 aaPredicted RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 STK33Q9BYT3 514 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 RAB6CQ9H0N0 254 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
RPS28-201ENST00000417088 NLGN3Q9NZ94 848 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 PCDHB1Q9Y5F3 818 aa15.1■□□□□ 0.01
RPS28-201ENST00000417088 LY6G6EA0A0G2JKS1 128 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 F8VZ95 297 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 SCAMP1O15126 338 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 AP1G1O43747 822 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 OPA1O60313 960 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 ALPPL2P10696 532 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 ACTN2P35609 894 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 ACVRL1P37023 503 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 HNRNPKP61978 463 aaKnown RBP eCLIP15.09■□□□□ 0.01
RPS28-201ENST00000417088 FZD2Q14332 565 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 TBC1D25Q3MII6 688 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 MANEALQ5VSG8 457 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 CDCP2Q5VXM1 449 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 KYAT3Q6YP21 454 aaKnown RBP15.09■□□□□ 0.01
RPS28-201ENST00000417088 PTAR1Q7Z6K3 402 aaPredicted RBP15.09■□□□□ 0.01
RPS28-201ENST00000417088 PLPP6Q8IY26 295 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 APOLD1Q96LR9 279 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 C1QTNF2Q9BXJ5 285 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 TM6SF2Q9BZW4 377 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 METTL5Q9NRN9 209 aaKnown RBP15.09■□□□□ 0.01
RPS28-201ENST00000417088 NDFIP2Q9NV92 336 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 DNAJC28Q9NX36 388 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 HECAQ9UBI9 543 aaPredicted RBP15.09■□□□□ 0.01
RPS28-201ENST00000417088 NOCTQ9UK39 431 aaKnown RBP15.09■□□□□ 0.01
RPS28-201ENST00000417088 U3KQA8 63 aa15.09■□□□□ 0.01
RPS28-201ENST00000417088 GCN1Q92616 2671 aaKnown RBP15.09■□□□□ 0.01
RPS28-201ENST00000417088 SPTY2D1-AS1A0A0U1RR47 76 aa15.08■□□□□ 0
RPS28-201ENST00000417088 CXorf51AA0A1B0GTR3 108 aa15.08■□□□□ 0
RPS28-201ENST00000417088 NEMP2A6NFY4 417 aa15.08■□□□□ 0
RPS28-201ENST00000417088 K7ESM1 405 aa15.08■□□□□ 0
RPS28-201ENST00000417088 NEBLO76041 1014 aa15.08■□□□□ 0
RPS28-201ENST00000417088 CSF2P04141 144 aa15.08■□□□□ 0
RPS28-201ENST00000417088 GKP32189 559 aa15.08■□□□□ 0
RPS28-201ENST00000417088 ADRA1BP35368 520 aa15.08■□□□□ 0
RPS28-201ENST00000417088 ABL2P42684 1182 aa15.08■□□□□ 0
RPS28-201ENST00000417088 NRG1Q02297 640 aaPredicted RBP15.08■□□□□ 0
RPS28-201ENST00000417088 C15orf59Q2T9L4 293 aaPredicted RBP15.08■□□□□ 0
RPS28-201ENST00000417088 CCDC14Q49A88 953 aa15.08■□□□□ 0
RPS28-201ENST00000417088 FAM181AQ8N9Y4 354 aa15.08■□□□□ 0
RPS28-201ENST00000417088 SLC20A1Q8WUM9 679 aa15.08■□□□□ 0
RPS28-201ENST00000417088 RXFP2Q8WXD0 754 aa15.08■□□□□ 0
RPS28-201ENST00000417088 ARHGEF2Q92974 986 aaKnown RBP15.08■□□□□ 0
RPS28-201ENST00000417088 VOPP1Q96AW1 172 aa15.08■□□□□ 0
RPS28-201ENST00000417088 ISG20Q96AZ6 181 aaKnown RBP15.08■□□□□ 0
RPS28-201ENST00000417088 LENG8Q96PV6 779 aaPredicted RBP15.08■□□□□ 0
RPS28-201ENST00000417088 KLF6Q99612 283 aaPredicted RBP15.08■□□□□ 0
RPS28-201ENST00000417088 MAGEB5Q9BZ81 275 aa15.08■□□□□ 0
RPS28-201ENST00000417088 ZDHHC6Q9H6R6 413 aa15.08■□□□□ 0
RPS28-201ENST00000417088 OR12D3Q9UGF7 316 aa15.08■□□□□ 0
RPS28-201ENST00000417088 IGLON5A6NGN9 336 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms