RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 DNA2P51530 1060 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 SGCGQ13326 291 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 PDE1CQ14123 709 aaPredicted RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 FZD2Q14332 565 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 NR0B2Q15466 257 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 DEFB133Q30KQ1 61 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 TMEM259Q4ZIN3 620 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 KIAA1614Q5VZ46 1190 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 RETSATQ6NUM9 610 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 GUSBP11Q6P575 273 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 INO80CQ6PI98 192 aaPredicted RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 CRTC1Q6UUV9 634 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 LINGO4Q6UY18 593 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 C11orf57Q6ZUT1 292 aaPredicted RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 PRICKLE2Q7Z3G6 844 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 C14orf80Q86SX3 495 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 SETD3Q86TU7 594 aaPredicted RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 ZSCAN30Q86W11 494 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 PASD1Q8IV76 773 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 DCAF4L2Q8NA75 395 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 CHST14Q8NCH0 376 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 WDR36Q8NI36 951 aaKnown RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 LMX1AQ8TE12 382 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 BTN2A2Q8WVV5 523 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 BMFQ96LC9 184 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 FAM81BQ96LP2 452 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 SLC46A1Q96NT5 459 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 CPXM1Q96SM3 734 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 PSMB7Q99436 277 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 SRRTQ9BXP5 876 aaKnown RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 TKTL2Q9H0I9 626 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 WDCPQ9H6R7 721 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 CAAP1Q9H8G2 361 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 SALL4Q9UJQ4 1053 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 ZDHHC9Q9Y397 364 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 PCDHGA8Q9Y5G5 932 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 ENTPD2Q9Y5L3 495 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 HEMK1Q9Y5R4 338 aaPredicted RBP10.24□□□□□ -0.77
MDC1-202ENST00000416571 U3KQA8 63 aa10.24□□□□□ -0.77
MDC1-202ENST00000416571 ATMQ13315 3056 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SPTY2D1-AS1A0A0U1RR47 76 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 EME2A4GXA9 379 aaPredicted RBP10.23□□□□□ -0.77
MDC1-202ENST00000416571 PYCARD-AS1I3L0S3 204 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 NEMP1O14524 444 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 TPP1O14773 563 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 MUSKO15146 869 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SMAD6O43541 496 aaKnown RBP10.23□□□□□ -0.77
MDC1-202ENST00000416571 DAB1O75553 588 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 CNTN5O94779 1100 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 ITGB7P26010 798 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 NOS2P35228 1153 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 MLLT3P42568 568 aaPredicted RBP10.23□□□□□ -0.77
MDC1-202ENST00000416571 THOP1P52888 689 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SPIDRQ14159 915 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 C5orf22Q49AR2 442 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 ALFQ53S48 1182 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 BRMS1LQ5PSV4 323 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 DPY19L3Q6ZPD9 716 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 FAM183BPQ6ZVS7 135 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 TFAP2DQ7Z6R9 452 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SPATA20Q8TB22 786 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 NELFBQ8WX92 580 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 NAT6Q93015 286 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 HEPHQ9BQS7 1158 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SPON2Q9BUD6 331 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 ACP6Q9NPH0 428 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 GPR27Q9NS67 375 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 RRN3Q9NYV6 651 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SPASTQ9UBP0 616 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 APOBEC3BQ9UH17 382 aaKnown RBP10.23□□□□□ -0.77
MDC1-202ENST00000416571 STAP1Q9ULZ2 295 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 ABCA12Q86UK0 2595 aa10.23□□□□□ -0.77
MDC1-202ENST00000416571 SPTAN1Q13813 2472 aaKnown RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 COL27A1Q8IZC6 1860 aaPredicted RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 CCDC187A0A096LP49 1063 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 A0A0D9SEW6 157 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 RAD51BO15315 384 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 TNFSF15O95150 251 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 WISP1O95388 367 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 CD44P16070 742 aaKnown RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 OR1E1P30953 314 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 L1CAMP32004 1257 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 KRT9P35527 623 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 SULT1E1P49888 294 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 SLC6A3Q01959 620 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 DEUP1Q05D60 604 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 PTK2BQ14289 1009 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 ARHGAP44Q17R89 818 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 ACBD5Q5T8D3 534 aaPredicted RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 ESRP1Q6NXG1 681 aaKnown RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 TTI2Q6NXR4 508 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 OLFML1Q6UWY5 402 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 SLC26A9Q7LBE3 791 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
MDC1-202ENST00000416571 RYBPQ8N488 228 aaPredicted RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 PCDH20Q8N6Y1 951 aaKnown RBP10.22□□□□□ -0.77
MDC1-202ENST00000416571 C1orf131Q8NDD1 294 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms