RNA–Protein interactions for RNA: ENST00000415455.5

MUC4-206, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-206ENST00000415455 SNX30Q5VWJ9 437 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 NCBP2-AS2Q69YL0 99 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 SLC44A1Q8WWI5 657 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 NAF1Q96HR8 494 aaKnown RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 DDX50Q9BQ39 737 aaKnown RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 PPCSQ9HAB8 311 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 UTP6Q9NYH9 597 aaKnown RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 TTC24A2A3L6 582 aaPredicted RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 C5orf60A6NFR6 353 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 CLGNO14967 610 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 USP1O94782 785 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 CCNB1P14635 433 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 KCNQ1P51787 676 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 ZNF177Q13360 481 aaPredicted RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 POLD3Q15054 466 aaPredicted RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 FBXO48Q5FWF7 155 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 MARC1Q5VT66 337 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 ZNF470Q6ECI4 717 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 KLC3Q6P597 504 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 C10orf107Q8IVU9 208 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 PNPLA1Q8N8W4 532 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 SNX31Q8N9S9 440 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 PPHLN1Q8NEY8 458 aaKnown RBP11.19□□□□□ -0.62
MUC4-206ENST00000415455 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 YY1AP1Q9H869 796 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 CYLDQ9NQC7 956 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
MUC4-206ENST00000415455 RBBP6Q7Z6E9 1792 aaKnown RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 PARP14Q460N5 1801 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 SMAPO00193 183 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 ADAM12O43184 909 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 SUPT7LO94864 414 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 MT-CYBP00156 380 aaPredicted RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 PAMP19021 973 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 COPAP53621 1224 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 PKNOX1P55347 436 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 SMAD3P84022 425 aaKnown RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 CDH18Q13634 790 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 FSCBQ5H9T9 825 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 NAPEPLDQ6IQ20 393 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 MAB21L3Q8N8X9 362 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 ICA1LQ8NDH6 482 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 AGAP2Q99490 1192 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 EBF4Q9BQW3 602 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 BTBD10Q9BSF8 475 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 IRAK2O43187 625 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 CALB2P22676 271 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 GP5P40197 560 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 IL1RL1Q01638 556 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 BTKQ06187 659 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 RNF43Q68DV7 783 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 CDHR3Q6ZTQ4 885 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 LDB1Q86U70 411 aaPredicted RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 ZNF567Q8N184 647 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 MIEF2Q96C03 454 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 PRR11Q96HE9 360 aaPredicted RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 AFF4Q9UHB7 1163 aaKnown RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 E9PAM4 449 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 FGBP02675 491 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 ZNF460Q14592 562 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 CYTH1Q15438 398 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 TAS2R42Q7RTR8 314 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 LCA5Q86VQ0 697 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 CERS2Q96G23 380 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 WDR55Q9H6Y2 383 aaPredicted RBP11.18□□□□□ -0.62
MUC4-206ENST00000415455 ACTL7BQ9Y614 415 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 SQORQ9Y6N5 450 aa11.18□□□□□ -0.62
MUC4-206ENST00000415455 NUP205Q92621 2012 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 ATP6AP2A0A1C7CYW4 349 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 MTSS1O43312 755 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 ATP6AP2O75787 350 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 GABRR2P28476 465 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 EPHA3P29320 983 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 KLC1Q07866 573 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 TRIM71Q2Q1W2 868 aaKnown RBP11.17□□□□□ -0.62
MUC4-206ENST00000415455 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 PIF1Q9H611 641 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 LGALS13Q9UHV8 139 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 DNMT3LQ9UJW3 386 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 RHOCP08134 193 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 IL4RP24394 825 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 C14orf80Q86SX3 495 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 SLC41A1Q8IVJ1 513 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 DENND2DQ9H6A0 471 aaPredicted RBP11.17□□□□□ -0.62
MUC4-206ENST00000415455 GGA2Q9UJY4 613 aa11.17□□□□□ -0.62
MUC4-206ENST00000415455 LSM7Q9UK45 103 aaKnown RBP11.17□□□□□ -0.62
MUC4-206ENST00000415455 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms