RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 RTL3Q8N8U3 475 aaKnown RBP10.15□□□□□ -0.78
DDB1-202ENST00000414411 MGARPQ8TDB4 240 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 DDI1Q8WTU0 396 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 DYDC1Q8WWB3 177 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 SLC39A7Q92504 469 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 PHACTR1Q9C0D0 580 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 CATSPERBQ9H7T0 1116 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 ECT2Q9H8V3 914 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 TRPV5Q9NQA5 729 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 NDFIP2Q9NV92 336 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 TBK1Q9UHD2 729 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 METRNQ9UJH8 293 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 FBXO10Q9UK96 956 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 CLEC4EQ9ULY5 219 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 TBC1D30Q9Y2I9 924 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 CAPN7Q9Y6W3 813 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 A0A1B0GVM2 712 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 EXOC1LA0A1B0GW35 172 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 TCAF2A6NFQ2 919 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 APOC4-APOC2K7ER74 178 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 ALOX15BO15296 676 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 HOXC11O43248 304 aaPredicted RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 NFATC1O95644 943 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 APOC2P02655 101 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 ASGR2P07307 311 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 VIMP08670 466 aaKnown RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 GCAP28676 217 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 GDF10P55107 478 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 RUNX3Q13761 415 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 MPP2Q14168 576 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 ITIH4Q14624 930 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 SPRED3Q2MJR0 410 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 CENPUQ71F23 418 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 PCGF5Q86SE9 256 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 CIR1Q86X95 450 aaPredicted RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 TDRPQ86YL5 185 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 UMODL1-AS1Q8N2C9 162 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 ANKS4BQ8N8V4 417 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 CCT6BQ92526 530 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 MAML1Q92585 1016 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 LMLNQ96KR4 655 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 ASB2Q96Q27 587 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 NOL6Q9H6R4 1146 aaKnown RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 ACTR5Q9H9F9 607 aaPredicted RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 PLK2Q9NYY3 685 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 GTSE1Q9NYZ3 720 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 SAMD15Q9P1V8 674 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 MFHAS1Q9Y4C4 1052 aa10.15□□□□□ -0.79
DDB1-202ENST00000414411 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.15□□□□□ -0.79
DDB1-202ENST00000414411 LUC7L3O95232 432 aaKnown RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 ADH1CP00326 375 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 CYBBP04839 570 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 TYRP14679 529 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 MAPKAPK2P49137 400 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 GAD2Q05329 585 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 SLC10A2Q12908 348 aaPredicted RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 FOXD4Q12950 439 aaPredicted RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 NR1H3Q13133 447 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 TFDP2Q14188 446 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 PAFAH1B3Q15102 231 aaKnown RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 TMED2Q15363 201 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 HIF1AQ16665 826 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 LACTB2Q53H82 288 aaPredicted RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 FSCBQ5H9T9 825 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 AFMIDQ63HM1 303 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 NCBP2-AS2Q69YL0 99 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 CXorf57Q6NSI4 855 aaKnown RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 SETD3Q86TU7 594 aaPredicted RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 RFX6Q8HWS3 928 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 ETFBKMTQ8IXQ9 262 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 PPIL6Q8IXY8 311 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 CCDC13Q8IYE1 715 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 ZBED8Q8IZ13 594 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 NPWQ8N729 165 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 OR52K2Q8NGK3 314 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 FIBINQ8TAL6 211 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 WFDC5Q8TCV5 224 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 CPT1BQ92523 772 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 BHMTQ93088 406 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 CHFRQ96EP1 664 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 BBS2Q9BXC9 721 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 MAK16Q9BXY0 300 aaKnown RBP10.14□□□□□ -0.79
DDB1-202ENST00000414411 BRD9Q9H8M2 597 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 KCNK9Q9NPC2 374 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 MUC3AQ02505 3323 aa10.14□□□□□ -0.79
DDB1-202ENST00000414411 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.13□□□□□ -0.79
DDB1-202ENST00000414411 RASA4BC9J798 803 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 NEDD8-MDP1E9PL57 170 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 RASA4O43374 803 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 CACNG3O60359 315 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 CISD3P0C7P0 127 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 ADH5P11766 374 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 ZFXP17010 805 aaPredicted RBP10.13□□□□□ -0.79
DDB1-202ENST00000414411 OR1E1P30953 314 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 PDIA2Q13087 525 aaKnown RBP10.13□□□□□ -0.79
DDB1-202ENST00000414411 ZNF177Q13360 481 aaPredicted RBP10.13□□□□□ -0.79
DDB1-202ENST00000414411 TDGQ13569 410 aa10.13□□□□□ -0.79
DDB1-202ENST00000414411 ANO4Q32M45 955 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms