RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SLC25A51Q9H1U9 297 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 LINC00597Q9H2U6 94 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 ABCB8Q9NUT2 735 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 HAUS2Q9NVX0 235 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 DUS2Q9NX74 493 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 GOLGA6AQ9NYA3 693 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 SEPT3Q9UH03 358 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 CHMP2BQ9UQN3 213 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 PLAAQ9Y263 795 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 AAR2Q9Y312 384 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 ACTL7AQ9Y615 435 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.76□□□□□ -1.33
VPS41-204ENST00000413141 TEX264Q9Y6I9 313 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 KIAA1549LQ6ZVL6 1849 aa6.76□□□□□ -1.33
VPS41-204ENST00000413141 MUC22E2RYF6 1773 aaPredicted RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 CXorf51AA0A1B0GTR3 108 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 HEPACAM2A8MVW5 462 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 AGPSO00116 658 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 STK25O00506 426 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 PSMD3O43242 534 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 HOXC11O43248 304 aaPredicted RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 USP12O75317 370 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 GJB3O75712 270 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 TMCC1O94876 653 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 CD160O95971 181 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ADH1CP00326 375 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 CPP00450 1065 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SHBGP04278 402 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MMP2P08253 660 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ADH5P11766 374 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 TYRP14679 529 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 TSHRP16473 764 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 IGFBP4P22692 258 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 HLA-FP30511 346 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ADRA1AP35348 466 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ELK3P41970 407 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 CD86P42081 329 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MTHFRP42898 656 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 RGRP47804 291 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SERPINH1P50454 418 aaKnown RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 PLK1P53350 603 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 GEMP55040 296 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 EIF3BP55884 814 aaKnown RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 GEMIN4P57678 1058 aaKnown RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 GPX6P59796 221 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 FAM193AP78312 1265 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SKOR1P84550 965 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 DSC2Q02487 901 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ZNF844Q08AG5 666 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 NIPAL4Q0D2K0 466 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 FCHO2Q0JRZ9 810 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MPP3Q13368 585 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SLC12A1Q13621 1099 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SLC29A2Q14542 456 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 DHCR24Q15392 516 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SLC14A2Q15849 920 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 KYNUQ16719 465 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 PITRM1Q5JRX3 1037 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 HP1BP3Q5SSJ5 553 aaPredicted RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 TRIM68Q6AZZ1 485 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 KDELC1Q6UW63 502 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 VITQ6UXI7 678 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 LINGO4Q6UY18 593 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 CAPN12Q6ZSI9 719 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 EP400NLQ6ZTU2 488 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 LINC00523Q86TU6 105 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 PRPF39Q86UA1 669 aaKnown RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 IGDCC3Q8IVU1 814 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ADGRG2Q8IZP9 1017 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MPP5Q8N3R9 675 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS41-204ENST00000413141 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS41-204ENST00000413141 IPMKQ8NFU5 416 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 OR52K1Q8NGK4 314 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 OR2W6PQ8NHA6 318 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 PYROXD1Q8WU10 500 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ACDQ96AP0 544 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 TADA1Q96BN2 335 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 LRRC39Q96DD0 335 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MRGPRX2Q96LB1 330 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 MYADMQ96S97 322 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 SH3GL2Q99962 352 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 TBL1YQ9BQ87 522 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 APOL2Q9BQE5 337 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 FICDQ9BVA6 458 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 FSD1LQ9BXM9 530 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 POMKQ9H5K3 350 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 LRRC4CQ9HCJ2 640 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 ZFP14Q9HCL3 533 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 CASS4Q9NQ75 786 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 VPS45Q9NRW7 570 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 PIH1D1Q9NWS0 290 aaKnown RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 KIAA1522Q9P206 1035 aaPredicted RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 LHX3Q9UBR4 397 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 GGA2Q9UJY4 613 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 INTS6Q9UL03 887 aaKnown RBP6.75□□□□□ -1.33
VPS41-204ENST00000413141 NFS1Q9Y697 457 aa6.75□□□□□ -1.33
VPS41-204ENST00000413141 REV3LO60673 3130 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms