RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SEPHS1P49903 392 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MLLT6P55198 1093 aaPredicted RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MYL6P60660 151 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ABHD18Q0P651 414 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF699Q32M78 642 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 FILIP1LQ4L180 1135 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 GLE1Q53GS7 698 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF667Q5HYK9 610 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MDH1BQ5I0G3 518 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 WLSQ5T9L3 541 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 TXNDC8Q6A555 127 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 VSTM1Q6UX27 236 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 RAD9BQ6WBX8 426 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 TMEM150AQ86TG1 271 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MON1AQ86VX9 555 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 EGFL6Q8IUX8 553 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MAML2Q8IZL2 1156 aaPredicted RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 TTC8Q8TAM2 541 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MYCBPAPQ8TBZ2 947 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 PARD3BQ8TEW8 1205 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 AENQ8WTP8 325 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 TRMT2BQ96GJ1 504 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MSANTD3Q96H12 275 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 PCED1BQ96HM7 432 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ZFYVE19Q96K21 471 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 TMEM168Q9H0V1 697 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 KCTD10Q9H3F6 313 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 CXorf56Q9H5V9 222 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 NOL6Q9H6R4 1146 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 FAM204AQ9H8W3 233 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 KIF9Q9HAQ2 790 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 LMAN1LQ9HAT1 526 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 GKN1Q9NS71 199 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 THG1LQ9NWX6 298 aaKnown RBP5.54□□□□□ -1.52
LINC00342-201ENST00000412393 RNF14Q9UBS8 474 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 FBLN5Q9UBX5 448 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 MAN1B1Q9UKM7 699 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 HPCAL4Q9UM19 191 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 NFE2L3Q9Y4A8 694 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 NME7Q9Y5B8 376 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 EML5Q05BV3 1969 aa5.54□□□□□ -1.52
LINC00342-201ENST00000412393 ZFHX2Q9C0A1 2572 aaPredicted RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TRAV19A0A0A6YYK7 116 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 A8MXQ7 604 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CHUKO15111 745 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 EIF3HO15372 352 aaKnown RBP eCLIP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 OPA1O60313 960 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 NPHS1O60500 1241 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 VNN1O95497 513 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CKMP06732 381 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CHRNB1P11230 501 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 PAMP19021 973 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 HNRNPH3P31942 346 aaKnown RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 VAMP7P51809 220 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 GYS2P54840 703 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CDH8P55286 799 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CSTF1Q05048 431 aaKnown RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CKAP4Q07065 602 aaKnown RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 MTAPQ13126 283 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 STIM1Q13586 685 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 RUNX3Q13761 415 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 LRRC32Q14392 662 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF268Q14587 947 aaPredicted RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 KCNB1Q14721 858 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 MEA1Q16626 185 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 SGSM1Q2NKQ1 1148 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ITPRIPL2Q3MIP1 535 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF528Q3MIS6 628 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ZACNQ401N2 412 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 FIGNQ5HY92 759 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 MIIPQ5JXC2 388 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF569Q5MCW4 686 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TDRD10Q5VZ19 366 aaKnown RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ISM2Q6H9L7 571 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 EMBQ6PCB8 327 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 C1orf228Q6PIY5 440 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TSSK4Q6SA08 328 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 DENND5BQ6ZUT9 1274 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 RALGPS2Q86X27 583 aaPredicted RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CCDC50Q8IVM0 306 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CCDC170Q8IYT3 715 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 IQCKQ8N0W5 287 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 GUF1Q8N442 669 aaKnown RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 MREGQ8N565 214 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TMEM174Q8WUU8 243 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 SEC14L1Q92503 715 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 P3H4Q92791 437 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 USP13Q92995 863 aaPredicted RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CAVIN3Q969G5 261 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 MBD6Q96DN6 1003 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 SPATA17Q96L03 361 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CEP295NLQ96MC4 621 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 IER2Q9BTL4 223 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 NT5C1AQ9BXI3 368 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 B3GNT5Q9BYG0 378 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ZNF518BQ9C0D4 1074 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms