RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 PARP15Q460N3 678 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 FAM46CQ5VWP2 391 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.71■□□□□ 0.43
HSPG2-204ENST00000412328 LEKR1Q6ZMV7 388 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 RFX8Q6ZV50 586 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 VPS36Q86VN1 386 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 TRIM69Q86WT6 500 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 OR14C36Q8NHC7 312 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 GRIN3AQ8TCU5 1115 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 SLC6A18Q96N87 628 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 NUP85Q9BW27 656 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 GTPBP2Q9BX10 602 aaKnown RBP17.71■□□□□ 0.43
HSPG2-204ENST00000412328 TM6SF2Q9BZW4 377 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 KDM4CQ9H3R0 1056 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 CATSPERBQ9H7T0 1116 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 IL21RQ9HBE5 538 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 LHX3Q9UBR4 397 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 IL36AQ9UHA7 158 aa17.71■□□□□ 0.43
HSPG2-204ENST00000412328 A0A1B0GVT2 93 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 FAM47DPA6NHR8 397 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 EEF2KO00418 725 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 RNF8O76064 485 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 PRNPP04156 253 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 CSRP1P21291 193 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 CSNK1EP49674 416 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 CARD16Q5EG05 197 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 PARS2Q7L3T8 475 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 OR8K1Q8NGG5 319 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 GANCQ8TET4 914 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 TSC1Q92574 1164 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 CCDC114Q96M63 670 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 HDAC8Q9BY41 377 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 ZDHHC5Q9C0B5 715 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 CWC15Q9P013 229 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 ANAPC7Q9UJX3 599 aa17.7■□□□□ 0.42
HSPG2-204ENST00000412328 FNDC3AQ9Y2H6 1198 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 TDRD6O60522 2096 aaKnown RBP17.7■□□□□ 0.42
HSPG2-204ENST00000412328 ZSCAN5CA6NGD5 496 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-204ENST00000412328 KPNA3O00505 521 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-204ENST00000412328 PRPSAP2O60256 369 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 TMCC1O94876 653 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 SYPP08247 313 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 DESP17661 470 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 ERCC2P18074 760 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 ITGB7P26010 798 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 GKP32189 559 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 CTSKP43235 329 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 HCAR3P49019 387 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 NDST2P52849 883 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 GEMIN4P57678 1058 aaKnown RBP17.69■□□□□ 0.42
HSPG2-204ENST00000412328 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-204ENST00000412328 SMTNL2Q2TAL5 461 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 ARSIQ5FYB1 569 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 CCDC122Q5T0U0 273 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 TP53INP2Q8IXH6 220 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 OR2AP1Q8NGE2 309 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 OR6K2Q8NGY2 324 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 FAM71BQ8TC56 605 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 CHP1Q99653 195 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 PREBQ9HCU5 417 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 MFHAS1Q9Y4C4 1052 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 SNX11Q9Y5W9 270 aa17.69■□□□□ 0.42
HSPG2-204ENST00000412328 WDFY3Q8IZQ1 3526 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 ZNF883P0CG24 379 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 RARAP10276 462 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 ARSEP51690 589 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 ADKP55263 362 aaKnown RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 RACK1P63244 317 aaKnown RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 KIF19Q2TAC6 998 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 UAP1L1Q3KQV9 507 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 INO80DQ53TQ3 878 aaPredicted RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 ATXN7L2Q5T6C5 722 aaPredicted RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 PSAPL1Q6NUJ1 521 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 POLNQ7Z5Q5 900 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 NETO2Q8NC67 525 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 ZNF564Q8TBZ8 553 aaPredicted RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 TEKT4Q8WW24 435 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 CASKIN2Q8WXE0 1202 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 CELF6Q96J87 481 aaKnown RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 HEPHQ9BQS7 1158 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 SLC39A8Q9C0K1 460 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 TPX2Q9ULW0 747 aaKnown RBP17.68■□□□□ 0.42
HSPG2-204ENST00000412328 PLXNB3Q9ULL4 1909 aa17.68■□□□□ 0.42
HSPG2-204ENST00000412328 CHD8Q9HCK8 2581 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 J3KR12 359 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 VILLO15195 856 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 PRAMEF11O60813 436 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 OPHN1O60890 802 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 ADRB3P13945 408 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 ABL2P42684 1182 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 NOVA1P51513 510 aaKnown RBP17.67■□□□□ 0.42
HSPG2-204ENST00000412328 ZNF135P52742 658 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-204ENST00000412328 CYTH1Q15438 398 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 ZNF423Q2M1K9 1284 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 TMEM259Q4ZIN3 620 aa17.67■□□□□ 0.42
HSPG2-204ENST00000412328 PPP6R3Q5H9R7 873 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-204ENST00000412328 N4BP2L1Q5TBK1 243 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-204ENST00000412328 DBX2Q6ZNG2 339 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms