RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZNF619Q8N2I2 560 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 SYT2Q8N9I0 419 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 NOC3LQ8WTT2 800 aaKnown RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 LINC00476Q8WZB0 136 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CAVIN3Q969G5 261 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CTHRC1Q96CG8 243 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 WDFY2Q96P53 400 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF341Q9BYN7 854 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CTDSP1Q9GZU7 261 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MMADHCQ9H3L0 296 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 SLC32A1Q9H598 525 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 FBXO28Q9NVF7 368 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 SELENONQ9NZV5 590 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 LRIT1Q9P2V4 623 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MGAT4CQ9UBM8 478 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MOSPD1Q9UJG1 213 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 AMFRQ9UKV5 643 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 SLC12A4Q9UP95 1085 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 UBE2J1Q9Y385 318 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TRPV2Q9Y5S1 764 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 A0A0U1RQK1 487 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 A0A1W2PQM1 296 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ARHGAP10A1A4S6 786 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF320A2RRD8 509 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 MBD3L5A6NJ08 208 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TRIM64CA6NLI5 447 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 C16orf96A6NNT2 1141 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 H0YAE9 185 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 CTDSP2O14595 271 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 SYNCRIPO60506 623 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PSMD10O75832 226 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TTLL1O95922 423 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 FTCDO95954 541 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 MYBL1P10243 752 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF37AP17032 561 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 CDH2P19022 906 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 HLA-DPA1P20036 260 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PCSK6P29122 969 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 CYP2C18P33260 490 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TTKP33981 857 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 MCM5P33992 734 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 RPL15P61313 204 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 OLR1P78380 273 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TXNL4AP83876 142 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 GOLGA8FQ08AF8 430 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PPA1Q15181 289 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 AAK1Q2M2I8 961 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D25Q3MII6 688 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 C5orf22Q49AR2 442 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 RUNDC3AQ59EK9 446 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF628Q5EBL2 1059 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 C9orf152Q5JTZ5 239 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ANKRD16Q6P6B7 361 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PET117Q6UWS5 81 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 KIAA1324Q6UXG2 1013 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 Q6YL49 198 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 DBX2Q6ZNG2 339 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 CHST3Q7LGC8 479 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ADGRA1Q86SQ6 560 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PEG10Q86TG7 708 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TMEM116Q8NCL8 245 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ABHD11Q8NFV4 315 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ACTRT2Q8TDY3 377 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PRPF31Q8WWY3 499 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 KRT35Q92764 455 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PTP4A1Q93096 173 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 SMARCE1Q969G3 411 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 KLHL29Q96CT2 875 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 SAT2Q96F10 170 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 CABS1Q96KC9 395 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 KLHL15Q96M94 604 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 RAB3IPQ96QF0 476 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TTC12Q9H892 705 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 PDE11AQ9HCR9 933 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 KCNK9Q9NPC2 374 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 SNX15Q9NRS6 342 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 DUSP22Q9NRW4 184 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 SERTAD4Q9NUC0 356 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ADPRHL2Q9NX46 363 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 SYBUQ9NX95 663 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 TRMT1Q9NXH9 659 aaKnown RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 DLL3Q9NYJ7 618 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 MPP6Q9NZW5 540 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 MARCH4Q9P2E8 410 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-204ENST00000412061 DNAJB9Q9UBS3 223 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 CD207Q9UJ71 328 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 BLOC1S6Q9UL45 172 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 AGTPBP1Q9UPW5 1226 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 ADAM18Q9Y3Q7 739 aa4.74□□□□□ -1.65
BRCA1-204ENST00000412061 M0QZQ0 153 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 DDX39AO00148 427 aaKnown RBP4.73□□□□□ -1.65
BRCA1-204ENST00000412061 QSOX1O00391 747 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 DIAPH2O60879 1101 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 ESRRBO95718 433 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 ADH4P08319 380 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 NPSP0C0P6 89 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 CCDC175P0C221 793 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 ENGP17813 658 aa4.73□□□□□ -1.65
BRCA1-204ENST00000412061 CPT2P23786 658 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms