RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 GLDCP23378 1020 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 CCNCP24863 283 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 ITGB7P26010 798 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 CHRNA3P32297 505 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 GJC1P36383 396 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 GARSP41250 739 aaKnown RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 PAPOLAP51003 745 aaKnown RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 SUOXP51687 545 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 NAP1L1P55209 391 aaKnown RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 NSUN2Q08J23 767 aaKnown RBP eCLIP8.36□□□□□ -1.07
RPE-204ENST00000411934 GALNT2Q10471 571 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 CARD16Q5EG05 197 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 PEAR1Q5VY43 1037 aaPredicted RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 LPCAT2Q7L5N7 544 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 ZNF354CQ86Y25 554 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 STK40Q8N2I9 435 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 UBL4BQ8N7F7 174 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 TRIM58Q8NG06 486 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 PCDH19Q8TAB3 1148 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 NSMCE1Q8WV22 266 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 RAB7BQ96AH8 199 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 TSGA13Q96PP4 275 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 ALS2CR12Q96Q35 445 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 PSKH2Q96QS6 385 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 TUBGCP5Q96RT8 1024 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 FAM129BQ96TA1 746 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 HEPHQ9BQS7 1158 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 DESI2Q9BSY9 194 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 MAK16Q9BXY0 300 aaKnown RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 CPEB1Q9BZB8 566 aaKnown RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 BTBD1Q9H0C5 482 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 IL36AQ9UHA7 158 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 IPO11Q9UI26 975 aaKnown RBP8.36□□□□□ -1.07
RPE-204ENST00000411934 AMFRQ9UKV5 643 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 PCDHA3Q9Y5H8 950 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 R4GN57 208 aa8.36□□□□□ -1.07
RPE-204ENST00000411934 hCG_1818297A0A087WSY0 165 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 MACROD2A1Z1Q3 448 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 GRID2IPA4D2P6 1211 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 C10orf142B7Z368 130 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 DFFAO00273 331 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 APOL1O14791 398 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PPP1R12AO14974 1030 aaPredicted RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 SMAD6O43541 496 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 AP1G1O43747 822 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 MAFKO60675 156 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 NDUFS2O75306 463 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PALMO75781 387 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 POP4O95707 220 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 IL1BP01584 269 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 CD48P09326 243 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 CES1P23141 567 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 SLC8A1P32418 973 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 CDKN2BP42772 138 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PXNP49023 591 aaPredicted RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 CCNHP51946 323 aaPredicted RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 RWDD2BP57060 319 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 RHOAP61586 193 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 AP1S1P61966 158 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PPIDQ08752 370 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 HNRNPDQ14103 355 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 PDK1Q15118 436 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 SLC14A2Q15849 920 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 ATP13A4Q4VNC1 1196 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 ALG1LQ6GMV1 187 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 NEK5Q6P3R8 708 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 LINGO4Q6UY18 593 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 DPY19L3Q6ZPD9 716 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PRR23BQ6ZRT6 265 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 NT5DC3Q86UY8 548 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PQLC3Q8N755 202 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PLD5Q8N7P1 536 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 ZNF366Q8N895 744 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PIP4K2CQ8TBX8 421 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 RAPGEF5Q92565 580 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 MAML1Q92585 1016 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 RUBCNQ92622 972 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 ZNF419Q96HQ0 510 aaPredicted RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 CELF6Q96J87 481 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 OLFM3Q96PB7 478 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 MGME1Q9BQP7 344 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 HDAC8Q9BY41 377 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 PREBQ9HCU5 417 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 DYRK4Q9NR20 520 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 ETNK2Q9NVF9 386 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 FAM86C1Q9NVL1 165 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 DTLQ9NZJ0 730 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 DKK3Q9UBP4 350 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 SUSD2Q9UGT4 822 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 CYP8B1Q9UNU6 501 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 FCF1Q9Y324 198 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 WASF2Q9Y6W5 498 aa8.35□□□□□ -1.07
RPE-204ENST00000411934 TNRC6BQ9UPQ9 1833 aaKnown RBP8.35□□□□□ -1.07
RPE-204ENST00000411934 NUP205Q92621 2012 aa8.34□□□□□ -1.07
RPE-204ENST00000411934 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.34□□□□□ -1.07
RPE-204ENST00000411934 TSPAN11A1L157 253 aa8.34□□□□□ -1.07
RPE-204ENST00000411934 GOLGA6L9A6NEM1 432 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms