RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 PMF1Q6P1K2 205 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 CLEC18BQ6UXF7 455 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 ERN2Q76MJ5 926 aaKnown RBP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 BEND5Q7L4P6 421 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 GRAMD1CQ8IYS0 662 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 FAM26EQ8N5C1 309 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 ATP6V0D2Q8N8Y2 350 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 CLEC18CQ8NCF0 446 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 CLEC4CQ8WTT0 213 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 SCG3Q8WXD2 468 aaKnown RBP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 CCDC47Q96A33 483 aaKnown RBP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 TMEM159Q96B96 161 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 EEF2KMTQ96G04 330 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 FEM1CQ96JP0 617 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 BMFQ96LC9 184 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 HSFY1Q96LI6 401 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 TBATAQ96M53 351 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 TMEM74Q96NL1 305 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 C2orf49Q9BVC5 232 aaPredicted RBP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 HDAC8Q9BY41 377 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 SLC13A1Q9BZW2 595 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 MIS12Q9H081 205 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 PISDQ9UG56 409 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 APOBEC3BQ9UH17 382 aaKnown RBP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 DACH1Q9UI36 760 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 ANAPC2Q9UJX6 822 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 NAALADL1Q9UQQ1 740 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 HS3ST2Q9Y278 367 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 MAN2B2Q9Y2E5 1009 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 PAXBP1Q9Y5B6 917 aa6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 USP9YO00507 2555 aaPredicted RBP6.14□□□□□ -1.43
HMGN1P20-201ENST00000411849 M0QYV0 167 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 NTN3O00634 580 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 MAP3K7O43318 606 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CLDN11O75508 207 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 TRUB2O95900 331 aaKnown RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 PAK4O96013 591 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FYNP06241 537 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CTSLP07711 333 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 SRCP12931 536 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CD82P27701 267 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CCKBRP32239 447 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CASRP41180 1078 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ME1P48163 572 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 NEK3P51956 506 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ADKP55263 362 aaKnown RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 SGCGQ13326 291 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 DRAP1Q14919 205 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 LAPTM4AQ15012 233 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CNGA2Q16280 664 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 EDRF1Q3B7T1 1238 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FOXD4L5Q5VV16 416 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 TCERG1LQ5VWI1 586 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 RESP18Q5W5W9 173 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ATL3Q6DD88 541 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CXorf57Q6NSI4 855 aaKnown RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 BORAQ6PGQ7 559 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 B3GNT8Q7Z7M8 397 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 TAC4Q86UU9 113 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 VASH2Q86V25 355 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 SLC35F3Q8IY50 421 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FSTL5Q8N475 847 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ARL10Q8N8L6 244 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ATP11CQ8NB49 1132 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 TTC13Q8NBP0 860 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 OR6C4Q8NGE1 309 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 OR2A12Q8NGT7 310 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 GRIN3AQ8TCU5 1115 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FOXD4L4Q8WXT5 416 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FAM149B1Q96BN6 582 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ALG14Q96F25 216 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 PAGE5Q96GU1 130 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 RPRD1AQ96P16 312 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 LENG8Q96PV6 779 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 PSMG3-AS1Q96PY0 264 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 PRMT1Q99873 361 aaKnown RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FUCA2Q9BTY2 467 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 FOXP3Q9BZS1 431 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 B3GNT4Q9C0J1 378 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 MUC3BQ9H195 1237 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 EPN3Q9H201 632 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 CAAP1Q9H8G2 361 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 LRRC4CQ9HCJ2 640 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ST7Q9NRC1 585 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 IL36AQ9UHA7 158 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 USP25Q9UHP3 1055 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 XPO7Q9UIA9 1087 aaKnown RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 KLF15Q9UIH9 416 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 TUBD1Q9UJT1 453 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 DOLKQ9UPQ8 538 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ZFR2Q9UPR6 939 aaKnown RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ARHGEF17Q96PE2 2063 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 ICE1Q9Y2F5 2266 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 NBASA2RRP1 2371 aa6.13□□□□□ -1.43
HMGN1P20-201ENST00000411849 PRAMEF33A0A0G2JMD5 474 aa6.12□□□□□ -1.43
HMGN1P20-201ENST00000411849 A0A1W2PQ27 194 aa6.12□□□□□ -1.43
HMGN1P20-201ENST00000411849 A0A1W2PQ64 194 aa6.12□□□□□ -1.43
HMGN1P20-201ENST00000411849 A0A1W2PQC6 194 aa6.12□□□□□ -1.43
HMGN1P20-201ENST00000411849 NEMP1O14524 444 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms