RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 WBP1Q96G27 269 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 DPH1Q9BZG8 443 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 CAAP1Q9H8G2 361 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 CPNE5Q9HCH3 593 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 ANLNQ9NQW6 1124 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 CSNK1G3Q9Y6M4 447 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 SPTY2D1-AS1A0A0U1RR47 76 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 CPED1A4D0V7 1026 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 POM121BA6NF01 834 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 SRGAP2O75044 1071 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 CSF2P04141 144 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 ADRB3P13945 408 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 TFE3P19532 575 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-220ENST00000411464 ITGB7P26010 798 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 RBMS1P29558 406 aaKnown RBP17.05■□□□□ 0.32
MRPL55-220ENST00000411464 L1CAMP32004 1257 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 RABIFP47224 123 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 FZD2Q14332 565 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 ISXQ2M1V0 245 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 PTPN20Q4JDL3 420 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 OTUD1Q5VV17 481 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-220ENST00000411464 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 KYAT3Q6YP21 454 aaKnown RBP17.05■□□□□ 0.32
MRPL55-220ENST00000411464 ZNF783Q6ZMS7 281 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 PARGQ86W56 976 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 ZNF548Q8NEK5 533 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-220ENST00000411464 OR7D4Q8NG98 312 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 GRAMD1AQ96CP6 724 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-220ENST00000411464 HEPHQ9BQS7 1158 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 CEP44Q9C0F1 390 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 WASF2Q9Y6W5 498 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 PTPRQQ9UMZ3 2332 aa17.05■□□□□ 0.32
MRPL55-220ENST00000411464 LY6G6EA0A0G2JKS1 128 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 ILVBLA1L0T0 632 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 I6L893 689 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 RIOK3O14730 519 aaKnown RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 FPGTO14772 594 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 NME1P15531 152 aaKnown RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 PON1P27169 355 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 SERPINH1P50454 418 aaKnown RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 BPIFB4P59827 614 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 CDKN3Q16667 212 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 SLC25A52Q3SY17 297 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 CARD16Q5EG05 197 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 SLC47A2Q86VL8 602 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 TMEM35BQ8NCS4 154 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 NT5C3BQ969T7 300 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 ATP13A1Q9HD20 1204 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 PLCB1Q9NQ66 1216 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 DNAJC12Q9UKB3 198 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 FADS3Q9Y5Q0 445 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 U3KQA8 63 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 MGAQ8IWI9 3026 aa17.04■□□□□ 0.32
MRPL55-220ENST00000411464 ARID1BQ8NFD5 2236 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 ASH1LQ9NR48 2969 aaKnown RBP17.04■□□□□ 0.32
MRPL55-220ENST00000411464 IGLV3-10A0A075B6K4 115 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 GTPBP10A4D1E9 387 aaKnown RBP17.03■□□□□ 0.32
MRPL55-220ENST00000411464 J3QKU1 62 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 FOXN3O00409 490 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-220ENST00000411464 NEMP1O14524 444 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 RAD51BO15315 384 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 AQP9O43315 295 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 AP1G1O43747 822 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 ZNF821O75541 412 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-220ENST00000411464 JUNDP17535 347 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 CLCN1P35523 988 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 PDE1CQ14123 709 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-220ENST00000411464 FGL2Q14314 439 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 C3orf38Q5JPI3 329 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 ZSCAN30Q86W11 494 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 TPCN2Q8NHX9 752 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 LMX1AQ8TE12 382 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 COL26A1Q96A83 441 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 VCPIP1Q96JH7 1222 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 LENG8Q96PV6 779 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-220ENST00000411464 TBCBQ99426 244 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 IL12RB2Q99665 862 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 ASCL3Q9NQ33 180 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 TMPRSS4Q9NRS4 437 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 GPR27Q9NS67 375 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 RWDD2AQ9UIY3 292 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 SALL4Q9UJQ4 1053 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 SATB2Q9UPW6 733 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 CFAP46Q8IYW2 2715 aa17.03■□□□□ 0.32
MRPL55-220ENST00000411464 SHROOM3Q8TF72 1996 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 IGLON5A6NGN9 336 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 TSPAN6O43657 245 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 LZTS3O60299 673 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 ZMPSTE24O75844 475 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 TGM2P21980 687 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 CCNHP51946 323 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 VAC14Q08AM6 782 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 NR0B2Q15466 257 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 DEFB133Q30KQ1 61 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 FAM102AQ5T9C2 384 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 GUSBP11Q6P575 273 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 IGF2-ASQ6U949 168 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms