RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 UNQ6126/PRO20091Q6UXV3 157 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CPEB2Q7Z5Q1 589 aaKnown RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 BCDIN3DQ7Z5W3 292 aaKnown RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ADCK1Q86TW2 530 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZSCAN30Q86W11 494 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 PLD3Q8IV08 490 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 RAVER1Q8IY67 606 aaKnown RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CCDC36Q8IYA8 594 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 C17orf53Q8N3J3 647 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CERS5Q8N5B7 392 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 NAT8LQ8N9F0 302 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ITLN1Q8WWA0 313 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ESAMQ96AP7 390 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 RMI2Q96E14 147 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAIM2Q9BWQ8 316 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 IPPKQ9H8X2 491 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 KCNH7Q9NS40 1196 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ASIC5Q9NY37 505 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CTTNBP2NLQ9P2B4 639 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRHDEQ9UKU6 1024 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZMYND8Q9ULU4 1186 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 DNAJC16Q9Y2G8 782 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 TNPO3Q9Y5L0 923 aaKnown RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 OR51B4Q9Y5P0 310 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZFP37Q9Y6Q3 630 aaPredicted RBP-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 DOCK10Q96BY6 2186 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 DNAH17Q9UFH2 4485 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 CDC42BPBQ9Y5S2 1711 aa-1.43□□□□□ -2.64
RNU4-88P-201ENST00000411220 PINLYPA6NC86 204 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 NPIPB11E5RHQ5 1161 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 G3V4G9 280 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 C19orf84I3L1E1 186 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 EYA2O00167 538 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 HCN1O60741 890 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 RNASEH2AO75792 299 aaKnown RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 C6orf47O95873 294 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 GASTP01350 101 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 CYP1A2P05177 515 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 KRT16P08779 473 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 GP9P14770 177 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF8P17098 575 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 DNAJB1P25685 340 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 SDHAP31040 664 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 TGFBR2P37173 567 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 NRIP1P48552 1158 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 INPP1P49441 399 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF165P49910 485 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PDX1P52945 283 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PDE1AP54750 535 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 RWDD2BP57060 319 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ARHGAP4P98171 946 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 MC2RQ01718 297 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 CHAF1AQ13111 956 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 BMS1Q14692 1282 aaKnown RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF630Q2M218 657 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 HIGD2BQ4VC39 106 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 FLYWCH1Q4VC44 716 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 DCST2Q5T1A1 773 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 GPR158Q5T848 1215 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 TXNRD3NBQ6F5E7 133 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 HEPHL1Q6MZM0 1159 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 Q6ZPB1 254 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 LRRC70Q7Z2Q7 622 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 VASH2Q86V25 355 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 LYPD6Q86Y78 171 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 CRYBG2Q8N1P7 616 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 CCDC82Q8N4S0 544 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ARRDC1Q8N5I2 433 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 KBTBD3Q8NAB2 608 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 GLIS1Q8NBF1 620 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM145Q8NBT3 493 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PSD4Q8NDX1 1056 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRSS33Q8NF86 280 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 OR10V1Q8NGI7 309 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF564Q8TBZ8 553 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 OSCP1Q8WVF1 389 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 RASL10AQ92737 203 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 BADQ92934 168 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 SNAPC3Q92966 411 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 OSBP2Q969R2 916 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PHF21AQ96BD5 680 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 RMDN1Q96DB5 314 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 TVP23CQ96ET8 276 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 HIST1H2AHQ96KK5 128 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF641Q96N77 438 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 C8orf37Q96NL8 207 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 HIST1H2AJQ99878 128 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 GPATCH1Q9BRR8 931 aaKnown RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PHF20Q9BVI0 1012 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 NPLQ9BXD5 320 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 TLR10Q9BXR5 811 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 BACH2Q9BYV9 841 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 AMBRA1Q9C0C7 1298 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PITHD1Q9GZP4 211 aaPredicted RBP-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 ISCUQ9H1K1 167 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 IL1RL2Q9HB29 575 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 STARD5Q9NSY2 213 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRKAG3Q9UGI9 489 aa-1.44□□□□□ -2.64
RNU4-88P-201ENST00000411220 AKAP9Q99996 3911 aa-1.45□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZFHX3Q15911 3703 aa-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms