RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 GNAQP50148 359 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 FOXO4P98177 505 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 DEFA5Q01523 94 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CDK18Q07002 472 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 C19orf57Q0VDD7 668 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 POU4F3Q15319 338 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 RNF220Q5VTB9 566 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 NIPAL1Q6NVV3 410 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 HAGHLQ6PII5 290 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 LDHAL6AQ6ZMR3 332 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 NUP54Q7Z3B4 507 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ANKS1BQ7Z6G8 1248 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 FUNDC1Q8IVP5 155 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ZBTB8OSQ8IWT0 167 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 MPP5Q8N3R9 675 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ADPRHL1Q8NDY3 354 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 AGAP11Q8TF27 550 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 REXO5Q96IC2 774 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 SHDQ96IW2 340 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 GAL3ST4Q96RP7 486 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TGS1Q96RS0 853 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 WRNIP1Q96S55 665 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ULBP1Q9BZM6 244 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 OR2B2Q9GZK3 357 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 WWP1Q9H0M0 922 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 C12orf10Q9HB07 376 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 HMX1Q9NP08 348 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 RGS18Q9NS28 235 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 RAD18Q9NS91 495 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CENPMQ9NSP4 180 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ZCCHC3Q9NUD5 404 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TBC1D29Q9UFV1 150 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ASB4Q9Y574 426 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ACEP12821 1306 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 A0A1B0GVL5 298 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ISPDA4D126 451 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TRIM49BA6NDI0 452 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CCT8L1PA6NM43 557 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TRIM49D1C9J1S8 452 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L15C9J2P7 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L10C9JJH3 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L13C9JLJ4 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L12C9JPN9 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L11C9JVI0 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L21D6R901 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L18D6R9N7 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L22D6RA61 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L17D6RBQ6 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L19D6RCP7 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L20D6RJB6 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TO15178 435 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 SH3BGRLO75368 114 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 PRAMEF12O95522 483 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 FTLP02792 175 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 SLC2A1P11166 492 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TFEBP19484 476 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 MAGEA4P43358 317 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 SCTRP47872 440 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CAMLGP49069 296 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 HNRNPMP52272 730 aaKnown RBP eCLIP5.3□□□□□ -1.563e-6■■■■□ 21.2
R3HDM1-204ENST00000410054 INHBEP58166 350 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 EIF3EP60228 445 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 USP17L24Q0WX57 530 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 POLD3Q15054 466 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 PRKD1Q15139 912 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 DHCR24Q15392 516 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 PAN3Q58A45 887 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 BEX5Q5H9J7 111 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 FAM102BQ5T8I3 360 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 SYDE2Q5VT97 1194 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 RPL13AP3Q6NVV1 102 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 Q6ZUG5 572 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 MOB1BQ7L9L4 216 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 OTOP3Q7RTS5 596 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CARFQ8N187 725 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CRACR2BQ8N4Y2 399 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 OR2L8Q8NGY9 312 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 POC1BQ8TC44 478 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 BPIFB1Q8TDL5 484 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 AUTS2Q8WXX7 1259 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 KAT2AQ92830 837 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 FAM122AQ96E09 287 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CYFIP2Q96F07 1278 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 IFT43Q96FT9 208 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 VAPAQ9P0L0 249 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 SLAIN2Q9P270 581 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 PCDHA12Q9UN75 941 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 PLEKHA6Q9Y2H5 1048 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 ANKRD34BA5PLL1 514 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 POM121BA6NF01 834 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 POLRMTO00411 1230 aaKnown RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 PSMG1O95456 288 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 TXNDC12O95881 172 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 IL1AP01583 271 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CD2P06729 351 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 CHMLP26374 656 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 IL6STP40189 918 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 GRIA1P42261 906 aa5.3□□□□□ -1.56
R3HDM1-204ENST00000410054 MRPL19P49406 292 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms