RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 ITGAXP20702 1163 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 BDNFP23560 247 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 ACVR2AP27037 513 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 LONP1P36776 959 aaKnown RBP3.19□□□□□ -1.9
RGPD3-202ENST00000409886 FMO5P49326 533 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 CYP2J2P51589 502 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SLC34A1Q06495 639 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 RALGDSQ12967 914 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 DNASE1L3Q13609 305 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SH2D4BQ5SQS7 431 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 ARTNQ5T4W7 220 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 NEPROQ6NW34 567 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 DCDC5Q6ZRR9 648 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SLC15A4Q8N697 577 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 FNDC8Q8TC99 324 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SPPL3Q8TCT6 385 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SHC3Q92529 594 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 LZTS2Q9BRK4 669 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 NGRNQ9NPE2 291 aaKnown RBP3.19□□□□□ -1.9
RGPD3-202ENST00000409886 DMAP1Q9NPF5 467 aaPredicted RBP3.19□□□□□ -1.9
RGPD3-202ENST00000409886 TBC1D22BQ9NU19 505 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 CHCHD3Q9NX63 227 aaKnown RBP3.19□□□□□ -1.9
RGPD3-202ENST00000409886 CACNG4Q9UBN1 327 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 TMEM247A6NEH6 219 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 TRIM64BA6NI03 449 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 CRTAMO95727 393 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 IFNB1P01574 187 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 KRT13P13646 458 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 CPB1P15086 417 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 MATN1P21941 496 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 PGS1Q32NB8 556 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 DUSP28Q4G0W2 176 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 TSTD2Q5T7W7 516 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 ARMCX2Q7L311 632 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 FAM35AQ86V20 835 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 THNSL1Q8IYQ7 743 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 ACER1Q8TDN7 264 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 RFFLQ8WZ73 363 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 FAR2Q96K12 515 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 FGD4Q96M96 766 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 YME1L1Q96TA2 773 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SLC13A1Q9BZW2 595 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 LRRC19Q9H756 370 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 GPCPD1Q9NPB8 672 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.19□□□□□ -1.9
RGPD3-202ENST00000409886 SELENONQ9NZV5 590 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 TMEM216Q9P0N5 145 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 VWA7Q9Y334 891 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 UGT2A1Q9Y4X1 527 aa3.19□□□□□ -1.9
RGPD3-202ENST00000409886 ANHXE9PGG2 379 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 OGTO15294 1046 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 GRM6O15303 877 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MSH4O15457 936 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 DHX15O43143 795 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NBNO60934 754 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 RSL1D1O76021 490 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NR3C1P04150 777 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PEPDP12955 493 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 HOXC8P31273 242 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PSMC5P62195 406 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NKG7Q16617 165 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 Q4G0T1 1027 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF789Q5FWF6 425 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ARHGAP17Q68EM7 881 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 XAF1Q6GPH4 301 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 IRGCQ6NXR0 463 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 KRT25Q7Z3Z0 450 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 FUNDC1Q8IVP5 155 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MFSD6LQ8IWD5 586 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 OR4M1Q8NGD0 313 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 AFG1LQ8WV93 481 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CYYR1Q96J86 154 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CCDC106Q9BWC9 280 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 BCAP29Q9UHQ4 241 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 FBXL21Q9UKT6 434 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 STK24Q9Y6E0 443 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CSPG4Q6UVK1 2322 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CCDC162PA2VCL2 907 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 I3L4J1 428 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZFYP08048 801 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SNHG28P0DPA3 235 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SPNP16150 400 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TGM4P49221 684 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF131P52739 623 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CDH8P55286 799 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MRPS35P82673 323 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SLC12A1Q13621 1099 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 RASA2Q15283 850 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SPA17Q15506 151 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 KNOP1Q1ED39 458 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CYP27C1Q4G0S4 372 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PKDCCQ504Y2 493 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 EFHC2Q5JST6 749 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 STPG1Q5TH74 334 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 IL23RQ5VWK5 629 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 KAZNQ674X7 775 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PLA2G4FQ68DD2 849 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CCDC71Q8IV32 467 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TRIM22Q8IYM9 498 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZBED8Q8IZ13 594 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms