RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PLPP6Q8IY26 295 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 TBC1D3Q8IZP1 549 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 ZCCHC9Q8N567 271 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CHD5Q8TDI0 1954 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 A0A1B0GTW7 788 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 SLC30A4O14863 429 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 BCAT2O15382 392 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 SLC7A4O43246 635 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 ENGP17813 658 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 AMPD1P23109 780 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 GJC1P36383 396 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CCNHP51946 323 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 LIMK1P53667 647 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 ADPRHP54922 357 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 SNRPD1P62314 119 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CCDC15Q0P6D6 951 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 MESDQ14696 234 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 INO80DQ53TQ3 878 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CPNE8Q86YQ8 564 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 LZTR1Q8N653 840 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 OR2AP1Q8NGE2 309 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CSPG4P5Q96PW8 444 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 PANX2Q96RD6 677 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 RTKNQ9BST9 563 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 ZDHHC6Q9H6R6 413 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 CAPN10Q9HC96 672 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 PCDH18Q9HCL0 1135 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 FSCN3Q9NQT6 498 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 INTUQ9ULD6 942 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 WASF2Q9Y6W5 498 aa18.26■□□□□ 0.51
PDLIM2-206ENST00000409141 PI4KAP42356 2102 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 C4orf47A7E2U8 309 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 J3KR12 359 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 DFFAO00273 331 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 TMCC1O94876 653 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 GSRP00390 522 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 IGHV4-34P06331 123 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 CD27P26842 260 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 MAGEA1P43355 309 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 CDH6P55285 790 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 RHOAP61586 193 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 ATP13A4Q4VNC1 1196 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 AFMIDQ63HM1 303 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 ARHGAP12Q8IWW6 846 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 CCDC170Q8IYT3 715 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 NETO2Q8NC67 525 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 OR6K2Q8NGY2 324 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 RFFLQ8WZ73 363 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 FAM131CQ96AQ9 280 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 ARRDC3Q96B67 414 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 PPP1R16AQ96I34 528 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 GTPBP2Q9BX10 602 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 TMEM9BQ9NQ34 198 aa18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 UBA2Q9UBT2 640 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-206ENST00000409141 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 RNF103O00237 685 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 KRIT1O00522 736 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 ARHGAP33O14559 1287 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 PRAMEF11O60813 436 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 POP4O95707 220 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 MAN1A1P33908 653 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 ARHGAP25P42331 645 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 MAPK8P45983 427 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 ATXN3P54252 364 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 MYLK3Q32MK0 819 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 ATXN7L2Q5T6C5 722 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 AGBL4Q5VU57 503 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 TMCO3Q6UWJ1 677 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 NPWQ8N729 165 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 KCTD6Q8NC69 237 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 C1orf216Q8TAB5 229 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 KDM4CQ9H3R0 1056 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 ETNK2Q9NVF9 386 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 MFHAS1Q9Y4C4 1052 aa18.24■□□□□ 0.51
PDLIM2-206ENST00000409141 DMXL1Q9Y485 3027 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 CDX4O14627 284 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 PLRG1O43660 514 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 MTA2O94776 668 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 SYPP08247 313 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 KRT7P08729 469 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 GKP32189 559 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 CYLC1P35663 651 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 CCR5P51681 352 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 TAS2R40P59535 323 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 CYTH1Q15438 398 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 SPA17Q15506 151 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 ERN2Q76MJ5 926 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 TSC1Q92574 1164 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 GDAP1L1Q96MZ0 367 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 HDAC8Q9BY41 377 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 SP110Q9HB58 689 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 RCOR3Q9P2K3 495 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 SLCO1B1Q9Y6L6 691 aa18.23■□□□□ 0.51
PDLIM2-206ENST00000409141 A0A1W2PPC4 97 aa18.22■□□□□ 0.51
PDLIM2-206ENST00000409141 DCDC2BA2VCK2 349 aa18.22■□□□□ 0.51
PDLIM2-206ENST00000409141 LCA5LO95447 670 aa18.22■□□□□ 0.51
PDLIM2-206ENST00000409141 IGSF6O95976 241 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms