RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 UMODL1-AS1Q8N2C9 162 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TTC16Q8NEE8 873 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF461Q8TAF7 563 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CCT6BQ92526 530 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PTPRN2Q92932 1015 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TOP1MTQ969P6 601 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PSMG2Q969U7 264 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 AZIN2Q96A70 460 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 GRAMD1AQ96CP6 724 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 VWCEQ96DN2 955 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 MYEOVQ96EZ4 313 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PAWRQ96IZ0 340 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF558Q96NG5 402 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 AGAP2Q99490 1192 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TBL1YQ9BQ87 522 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 MECRQ9BV79 373 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 FSD1LQ9BXM9 530 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 OXCT2Q9BYC2 517 aaPredicted RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 IL22Q9GZX6 179 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 VPS11Q9H270 941 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 GKN1Q9NS71 199 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 C20orf96Q9NUD7 363 aaPredicted RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TMEM248Q9NWD8 314 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 DONSONQ9NYP3 566 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 AFF4Q9UHB7 1163 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 DNMT3LQ9UJW3 386 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PLLPQ9Y342 182 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ZCWPW2A0A1B0GU75 182 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 MAGEB16A2A368 324 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TTC24A2A3L6 582 aaPredicted RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TPP1O14773 563 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 RAMP2O60895 175 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 USP1O94782 785 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 OAS1P00973 400 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SOD2P04179 222 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ITGA2BP08514 1039 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CLTBP09497 229 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ZDHHC11BP0C7U3 371 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ALADP13716 330 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CSF2RAP15509 400 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ITGB8P26012 769 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CNTFP26441 200 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TYK2P29597 1187 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 GMPRP36959 345 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ACVRL1P37023 503 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 GP5P40197 560 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CHRNA4P43681 627 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ALDH1A3P47895 512 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 RENBPP51606 427 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 NDST2P52849 883 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 GEMP55040 296 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC10A7Q0GE19 358 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 HNRNPDQ14103 355 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 POLD3Q15054 466 aaPredicted RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 AFMIDQ63HM1 303 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 NADSYN1Q6IA69 706 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 C16orf46Q6P387 395 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 STRA8Q7Z7C7 330 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 LRRC49Q8IUZ0 686 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 LGI2Q8N0V4 545 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF276Q8N554 614 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC25A41Q8N5S1 370 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 NSMCE1Q8WV22 266 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 IARS2Q9NSE4 1012 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PPARGC1AQ9UBK2 798 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 DCTN4Q9UJW0 460 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SOX13Q9UN79 622 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 STARD13Q9Y3M8 1113 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 BACE2Q9Y5Z0 518 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 IGLV3-10A0A075B6K4 115 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 FAM237BA0A1B0GVD1 139 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF840PA6NDX5 716 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 F5H5T6 163 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PRRG1O14668 218 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SCAMP3O14828 347 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CACNG3O60359 315 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 IGLV3-27P01718 113 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ALDOAP04075 364 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SPATA31D3P0C874 917 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 DHRS4L1P0CG22 281 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 IRF1P10914 325 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TACR2P21452 398 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 ELF1P32519 619 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CD86P42081 329 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 MAGEA9P43362 315 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 HARS2P49590 506 aaKnown RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 KPNA1P52294 538 aaPredicted RBP4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 WNT3AP56704 352 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 RING1Q06587 406 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PLD1Q13393 1074 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SEPT6Q14141 434 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 LRRC26Q2I0M4 334 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 PPM1JQ5JR12 505 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 HECTD3Q5T447 861 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 GRTP1Q5TC63 336 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 RGS9BPQ6ZS82 235 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 SPATA31D4Q6ZUB0 917 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 OTOP2Q7RTS6 562 aa4.04□□□□□ -1.76
LRRTM4-201ENST00000409088 CMC1Q7Z7K0 106 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms