RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 E4F1Q66K89 784 aaPredicted RBP19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 ERN2Q76MJ5 926 aaKnown RBP19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 PCDH20Q8N6Y1 951 aaKnown RBP19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 MFSD2AQ8NA29 543 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 FUCA2Q9BTY2 467 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 TM6SF2Q9BZW4 377 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 DYRK4Q9NR20 520 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 MYO6Q9UM54 1294 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 DMTF1Q9Y222 760 aa19.66■□□□□ 0.74
SMARCB1-204ENST00000407422 A0A1W2PQU0 124 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 SLC31A1O15431 190 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 PRLRP16471 622 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 CCNHP51946 323 aaPredicted RBP19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 SETMARQ53H47 684 aaPredicted RBP19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 SLC45A4Q5BKX6 768 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 KDF1Q8NAX2 398 aaPredicted RBP19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 MYOCQ99972 504 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 CNPY3Q9BT09 278 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 HDAC8Q9BY41 377 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 MAGEH1Q9H213 219 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 RETREG1Q9H6L5 497 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 ZMIZ1Q9ULJ6 1067 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 TDRD6O60522 2096 aaKnown RBP19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 ANKRD62A6NC57 917 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 RAMP2O60895 175 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 L1CAMP32004 1257 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 GKP32189 559 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 NUDT1P36639 197 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 ETFBP38117 255 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 STAT4Q14765 748 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 IQCB1Q15051 598 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 POLD3Q15054 466 aaPredicted RBP19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 ZNF284Q2VY69 593 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 EFHC2Q5JST6 749 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 DCUN1D2Q6PH85 259 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 OR6K2Q8NGY2 324 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 SAP25Q8TEE9 199 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 HEPHQ9BQS7 1158 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 NOL6Q9H6R4 1146 aaKnown RBP19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 FZD3Q9NPG1 666 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 FZD10Q9ULW2 581 aa19.65■□□□□ 0.74
SMARCB1-204ENST00000407422 ANKRD11Q6UB99 2663 aaPredicted RBP19.64■□□□□ 0.74
SMARCB1-204ENST00000407422 A0A1B0GTH6 734 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 PRAMEF26H0Y7S4 382 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 ATMINO43313 823 aaPredicted RBP19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 TNFSF14O43557 240 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 DKK1O94907 266 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 PCDH8O95206 1070 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 EPHB2P29323 1055 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 CCDC15Q0P6D6 951 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 BNIP3Q12983 259 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 MAMLD1Q13495 774 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 FILIP1LQ4L180 1135 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 SEL1L3Q68CR1 1132 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 NEK5Q6P3R8 708 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 HORMAD1Q86X24 394 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 TMEM145Q8NBT3 493 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 PPP1R16AQ96I34 528 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 HAUS4Q9H6D7 363 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 ZDHHC6Q9H6R6 413 aa19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 ZFR2Q9UPR6 939 aaKnown RBP19.64■□□□□ 0.73
SMARCB1-204ENST00000407422 CREB3O43889 395 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 ITGAVP06756 1048 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 ITGB7P26010 798 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 EPHA8P29322 1005 aaPredicted RBP19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 ASIC2Q16515 512 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 CCDC157Q569K6 752 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 ZNF571Q7Z3V5 609 aaPredicted RBP19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 TMC6Q7Z403 805 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 IQCHQ86VS3 1027 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 RTL3Q8N8U3 475 aaKnown RBP19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 NETO2Q8NC67 525 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 VOPP1Q96AW1 172 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 ISG20Q96AZ6 181 aaKnown RBP19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 KLC2Q9H0B6 622 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 ERVMER34-1Q9H9K5 563 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 HPCAL4Q9UM19 191 aa19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 COL5A1P20908 1838 aaPredicted RBP19.63■□□□□ 0.73
SMARCB1-204ENST00000407422 A0A1W2PQC6 194 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 KDELR3O43731 214 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 ADRB3P13945 408 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 ARRB1P49407 418 aaPredicted RBP19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 NEK3P51956 506 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 RYBPQ8N488 228 aaPredicted RBP19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 VCPIP1Q96JH7 1222 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 TTYH3Q9C0H2 523 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 AIPL1Q9NZN9 384 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 FTSJ1Q9UET6 329 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 KNTC1P50748 2209 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 PKD1L2Q7Z442 2459 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 CXorf51AA0A1B0GTR3 108 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 SYCE3A1L190 88 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 OVGP1Q12889 678 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 NR1I3Q14994 352 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 INAVAQ3KP66 663 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 SFMBT2Q5VUG0 894 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 PLEKHA7Q6IQ23 1121 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 FBXL19Q6PCT2 694 aa19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 CCNI2Q6ZMN8 369 aaPredicted RBP19.62■□□□□ 0.73
SMARCB1-204ENST00000407422 PARS2Q7L3T8 475 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms