RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 CINPQ9BW66 212 aaPredicted RBP17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 SEPT3Q9UH03 358 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZKSCAN5Q9Y2L8 839 aa17.07■□□□□ 0.32
HMGA1P7-201ENST00000406908 RNF103O00237 685 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 PPP1R12AO14974 1030 aaPredicted RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 AXIN1O15169 862 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 FANCGO15287 622 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 CEP104O60308 925 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 GSRP00390 522 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 CTSLP07711 333 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 GKP32189 559 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 CHRNA3P32297 505 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 RECQLP46063 649 aaPredicted RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 SNRPD1P62314 119 aaKnown RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF33AQ06730 810 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 AP1B1Q10567 949 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 ELAVL3Q14576 367 aaKnown RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 MARC1Q5VT66 337 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZC3H18Q86VM9 953 aaKnown RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 CACUL1Q86Y37 369 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 MMAAQ8IVH4 418 aaKnown RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 PGBD5Q8N414 524 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 OR6K2Q8NGY2 324 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 OR8D1Q8WZ84 308 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 NELL1Q92832 810 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 SIPA1Q96FS4 1042 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF419Q96HQ0 510 aaPredicted RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 EXOC2Q96KP1 924 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 PSKH2Q96QS6 385 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 TPSD1Q9BZJ3 242 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 BRD8Q9H0E9 1235 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 C10orf88Q9H8K7 445 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 FBRSQ9HAH7 460 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 EVLQ9UI08 416 aaPredicted RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 SARDHQ9UL12 918 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 PPM1HQ9ULR3 514 aa17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 R3HDM2Q9Y2K5 976 aaKnown RBP17.06■□□□□ 0.32
HMGA1P7-201ENST00000406908 CCDC163A0A0D9SF12 145 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 KCNK1O00180 336 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 INSIG1O15503 277 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 JCHAINP01591 159 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 CCNB1P14635 433 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 RENBPP51606 427 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 XRCC4Q13426 336 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 PRKD1Q15139 912 aaPredicted RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 MYLK3Q32MK0 819 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF528Q3MIS6 628 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 ARSIQ5FYB1 569 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 KIAA1324Q6UXG2 1013 aaKnown RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 RYBPQ8N488 228 aaPredicted RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 PRSS33Q8NF86 280 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 TFB1MQ8WVM0 346 aaKnown RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 PRCCQ92733 491 aaPredicted RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 PBKQ96KB5 322 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 HEPHQ9BQS7 1158 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 RBM22Q9NW64 420 aaKnown RBP eCLIP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 SNX12Q9UMY4 172 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 FARP1Q9Y4F1 1045 aaPredicted RBP17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 WASF2Q9Y6W5 498 aa17.05■□□□□ 0.32
HMGA1P7-201ENST00000406908 TTC24A2A3L6 582 aaPredicted RBP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 H0Y858 1186 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 H7C0C1 242 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 ALOX15BO15296 676 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 RNASEH1O60930 286 aaKnown RBP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 GJB3O75712 270 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 POP4O95707 220 aaKnown RBP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 IGSF6O95976 241 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 IL1BP01584 269 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 FGGP02679 453 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 SLC8A1P32418 973 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 MMP13P45452 471 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 ATP5OP48047 213 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 METAP1P53582 386 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 EIF3EP60228 445 aaKnown RBP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 MAXP61244 160 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 IFI35P80217 286 aaPredicted RBP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 NSUN2Q08J23 767 aaKnown RBP eCLIP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 TCF15Q12870 199 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZBTB17Q13105 803 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF235Q14590 738 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 CST6Q15828 149 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF776Q68DI1 518 aaPredicted RBP17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 WDR5BQ86VZ2 330 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 LONP2Q86WA8 852 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 PIP4K2CQ8TBX8 421 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 COG1Q8WTW3 980 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 MS4A14Q96JA4 679 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 NSMCE3Q96MG7 304 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 OSBPL9Q96SU4 736 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 IL12RB2Q99665 862 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms