RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 RTKNQ9BST9 563 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 PRRG3Q9BZD7 231 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 RSAD1Q9HA92 442 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ACP6Q9NPH0 428 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 IMPAD1Q9NX62 359 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 MRPL39Q9NYK5 338 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 NUDT5Q9UKK9 219 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 FRMPD3Q5JV73 1810 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 DNAJC25-GNG10A0A024R161 153 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 LOC110117498-PIK3R3F6TDL0 507 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CPNE3O75131 537 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CLPXO76031 633 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 SUPT7LO94864 414 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 VAPBO95292 243 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 PIGNO95427 931 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CDH1P12830 882 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 GNL1P36915 607 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 HK2P52789 917 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 NSUN2Q08J23 767 aaKnown RBP eCLIP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 MGAT5Q09328 741 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 HERC3Q15034 1050 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ARL13BQ3SXY8 428 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 VWA5B1Q5TIE3 1220 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 TWF2Q6IBS0 349 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 FAM45BPQ6NSW5 357 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ARCQ7LC44 396 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 TRIM69Q86WT6 500 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 TAGAPQ8N103 731 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 NXNL1Q96CM4 212 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 GPRASP2Q96D09 838 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 MS4A4AQ96JQ5 239 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 PRICKLE1Q96MT3 831 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 KCTD14Q9BQ13 255 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ADAM7Q9H2U9 754 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CYP4F12Q9HCS2 524 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 FAM49BQ9NUQ9 324 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ING3Q9NXR8 418 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 SAE1Q9UBE0 346 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 STXBP5LQ9Y2K9 1186 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 DOCK5Q9H7D0 1870 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 DHRS12A0PJE2 317 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 DCAF8L1A6NGE4 600 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 SAGE2PA6NJ88 616 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 UGT2B4P06133 528 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 APOA4P06727 396 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 TBXAS1P24557 533 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CNTFP26441 200 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 GTF2A2P52657 109 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 OR2B6P58173 313 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ILF2Q12905 390 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 KCNJ8Q15842 424 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 SNRNP35Q16560 246 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 NFIL3Q16649 462 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CA9Q16790 459 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 SHROOM1Q2M3G4 852 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ASTE1Q2TB18 679 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 EML3Q32P44 896 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ARHGAP17Q68EM7 881 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 DCDC5Q6ZRR9 648 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 FRMD7Q6ZUT3 714 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 C12orf56Q8IXR9 622 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ZC3H3Q8IXZ2 948 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 EMC1Q8N766 993 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 OR6P1Q8NGX9 317 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF560Q96MR9 790 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 C7orf26Q96N11 449 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 PNMA5Q96PV4 448 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 NPAS2Q99743 824 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 EBF4Q9BQW3 602 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 TINF2Q9BSI4 451 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 RHOBTB2Q9BYZ6 727 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 WDR55Q9H6Y2 383 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 KLHL3Q9UH77 587 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 EGFL7Q9UHF1 273 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 STOML2Q9UJZ1 356 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ADAMTS6Q9UKP5 1117 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 VAV3Q9UKW4 847 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 PSME2Q9UL46 239 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 OGDHLQ9ULD0 1010 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 RUVBL2Q9Y230 463 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 A8MU76 341 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CENPBD1B2RD01 187 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 AURKAO14965 403 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CCNE2O96020 404 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 PDGFRAP16234 1089 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ENDOUP21128 410 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 YAP1P46937 504 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 MAPK12P53778 367 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 NAGLUP54802 743 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 SLC18A2Q05940 514 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CSTF3Q12996 717 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ZNF267Q14586 743 aaPredicted RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 QPRTQ15274 297 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 TAB1Q15750 504 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 FAM98BQ52LJ0 330 aaKnown RBP5.93□□□□□ -1.46
HDAC9-203ENST00000406072 CHADLQ6NUI6 762 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 KCNK18Q7Z418 384 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 ZBTB33Q86T24 672 aa5.93□□□□□ -1.46
HDAC9-203ENST00000406072 KRT73Q86Y46 540 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms