RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FAM149B1Q96BN6 582 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 VPS39Q96JC1 886 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 ZFRQ96KR1 1074 aaKnown RBP20.13■□□□□ 0.81
CCDC47-202ENST00000403162 UBE2OQ9C0C9 1292 aaKnown RBP20.13■□□□□ 0.81
CCDC47-202ENST00000403162 VTI1BQ9UEU0 232 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 PACSIN3Q9UKS6 424 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 FRMPD3Q5JV73 1810 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 SLCO1B7G3V0H7 640 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 GRID2O43424 1007 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 CLPTM1O96005 669 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 LMO2P25791 158 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 PITX1P78337 314 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 PRKAA1Q13131 559 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 RFTN1Q14699 578 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 ZNF410Q86VK4 478 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 LCA5Q86VQ0 697 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 TP53INP2Q8IXH6 220 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 TMEM151AQ8N4L1 468 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 DNAAF3Q8N9W5 541 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 DRAXINQ8NBI3 349 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 EZH1Q92800 747 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 C1QTNF1Q9BXJ1 281 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 MRPS26Q9BYN8 205 aaKnown RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 ZNF696Q9H7X3 374 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 CLIC5Q9NZA1 410 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 AP4B1Q9Y6B7 739 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 TSC2P49815 1807 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 NEMP1O14524 444 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 TNFAIP8O95379 198 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 EPHA3P29320 983 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 GRIA4P48058 902 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 HSPA13P48723 471 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 NPY2RP49146 381 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 ADIGQ0VDE8 80 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 KIZQ2M2Z5 673 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 ANO4Q32M45 955 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 PDZD4Q76G19 769 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 RCN3Q96D15 328 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 MFSD3Q96ES6 412 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 GPR22Q99680 433 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 DNAI2Q9GZS0 605 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 ATXN10Q9UBB4 475 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 GINS2Q9Y248 185 aa20.12■□□□□ 0.81
CCDC47-202ENST00000403162 PDCD11Q14690 1871 aaKnown RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
CCDC47-202ENST00000403162 PRSS51A0A1B0GVH4 220 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 A0A1W2PQ45 241 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 A0A1W2PQY0 241 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 VILLO15195 856 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 TADA2AO75478 443 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 PIGNO95427 931 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 PENKP01210 267 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 F7P08709 466 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 TFEBP19484 476 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 ABCG1P45844 678 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 NSUN2Q08J23 767 aaKnown RBP eCLIP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 CEACAM7Q14002 265 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 ARL13AQ5H913 290 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 FBXO47Q5MNV8 452 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 PIGZQ86VD9 579 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 EGFL6Q8IUX8 553 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 B4GALNT2Q8NHY0 566 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 GBA3Q9H227 469 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 SNX25Q9H3E2 840 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 TASP1Q9H6P5 420 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 C20orf96Q9NUD7 363 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 STAP1Q9ULZ2 295 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 LZTS1Q9Y250 596 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 BRCA2P51587 3418 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 TK2O00142 265 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 NCAM2O15394 837 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 BCAS2O75934 225 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 SBK3P0C264 359 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 SPATA31D3P0C874 917 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 HOXA11P31270 313 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 CREB5Q02930 508 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 PPIDQ08752 370 aaKnown RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 USP41Q3LFD5 358 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 PABPC1LQ4VXU2 614 aaKnown RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 SLC27A1Q6PCB7 646 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 SPATA31D4Q6ZUB0 917 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 ACVR1CQ8NER5 493 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 NDRG1Q92597 394 aaKnown RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 NMD3Q96D46 503 aaKnown RBP20.11■□□□□ 0.81
CCDC47-202ENST00000403162 ZBTB26Q9HCK0 441 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 GDAP2Q9NXN4 497 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 NSMCE4AQ9NXX6 385 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 CDYLQ9Y232 598 aa20.11■□□□□ 0.81
CCDC47-202ENST00000403162 M0QYT0 321 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ME2P23368 584 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 DNAJB1P25685 340 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 TKTP29401 623 aaKnown RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 CERCAMQ5T4B2 595 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 TAF2Q6P1X5 1199 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ALKAL1Q6UXT8 129 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 LILRA2Q8N149 483 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 HIC2Q96JB3 615 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 SLC2A13Q96QE2 648 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 MLPHQ9BV36 600 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms