RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 IKBKGQ9Y6K9 419 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 MTCL1Q9Y4B5 1905 aaKnown RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 LUC7L3O95232 432 aaKnown RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 MMP2P08253 660 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 INHBAP08476 426 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 GLDCP23378 1020 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 CD86P42081 329 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 PPARDQ03181 441 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 ZNF235Q14590 738 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 RFTN1Q14699 578 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 CRYMQ14894 314 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 MPPE1Q53F39 396 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 PRSS36Q5K4E3 855 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 SPANXN3Q5MJ09 141 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 MPP7Q5T2T1 576 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 ELMSAN1Q6PJG2 1045 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 SRRM1Q8IYB3 904 aaKnown RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 BBS5Q8N3I7 341 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 DDI1Q8WTU0 396 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 TADA1Q96BN2 335 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 ZNF707Q96C28 371 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 SELENOSQ9BQE4 189 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 FSD1LQ9BXM9 530 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 POLR1EQ9GZS1 481 aaKnown RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 NKX2-4Q9H2Z4 354 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 TLE6Q9H808 572 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 UBA2Q9UBT2 640 aaPredicted RBP13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 SEPT3Q9UH03 358 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
CEACAM1-206ENST00000403136 FAM237BA0A1B0GVD1 139 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 TTC24A2A3L6 582 aaPredicted RBP13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 CCDC85CA6NKD9 419 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 CBX4O00257 560 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 ZNF197O14709 1029 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 MUSKO15146 869 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 BRAFP15056 766 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 GNGT1P63211 74 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 IHHQ14623 411 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 ANKRD20A4Q4UJ75 823 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 PCID2Q5JVF3 399 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 CES3Q6UWW8 571 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 KDELC2Q7Z4H8 507 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 CCDC117Q8IWD4 279 aaPredicted RBP13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 USP13Q92995 863 aaPredicted RBP13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 PSKH2Q96QS6 385 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 SEMA3CQ99985 751 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 FEM1AQ9BSK4 669 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 LMAN2LQ9H0V9 348 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 ARNT2Q9HBZ2 717 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 CHRAC1Q9NRG0 131 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 TDP1Q9NUW8 608 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 HAUS2Q9NVX0 235 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 SENP1Q9P0U3 644 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 ZNF180Q9UJW8 692 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 SOX13Q9UN79 622 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 CCL26Q9Y258 94 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 OR51B4Q9Y5P0 310 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 ACTL7AQ9Y615 435 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 FAM169AQ9Y6X4 670 aa13.49□□□□□ -0.25
CEACAM1-206ENST00000403136 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 A0A1W2PPM1 405 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 USP1O94782 785 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 MZF1P28698 734 aaPredicted RBP13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 CYTH1Q15438 398 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 PCSK7Q16549 785 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 ALG1LQ6GMV1 187 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 POTEHQ6S545 545 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 TPGS1Q6ZTW0 290 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 UNC5BQ8IZJ1 945 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 MZB1Q8WU39 189 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 ALG14Q96F25 216 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 GDF15Q99988 308 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 KIFC1Q9BW19 673 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 TRABDQ9H4I3 376 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 KCNK9Q9NPC2 374 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 PPANQ9NQ55 473 aaKnown RBP13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 ZMYM5Q9UJ78 669 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 DOCK6Q96HP0 2047 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 CEP290O15078 2479 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 OBSL1O75147 1896 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 ZCWPW2A0A1B0GU75 182 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 ZMPSTE24O75844 475 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 FAM155BO75949 473 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 CHN1P15882 459 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 ARF5P84085 180 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 MGAT5Q09328 741 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 CDH18Q13634 790 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 RAB30Q15771 203 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 DUSP6Q16828 381 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 LGSNQ5TDP6 509 aa13.48□□□□□ -0.25
CEACAM1-206ENST00000403136 PPP2R2DQ66LE6 453 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms