RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 FNDC3BQ53EP0 1204 aaKnown RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 TCP11X2Q5H9J9 407 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 RNFT1Q5M7Z0 435 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 FBXL22Q6P050 247 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 NEK5Q6P3R8 708 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 ARMCX6Q7L4S7 300 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 SLC47A2Q86VL8 602 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 CCDC117Q8IWD4 279 aaPredicted RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 DEFB106AQ8N104 65 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 CACTIN-AS1Q8N1I8 211 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 TMEM35BQ8NCS4 154 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 DEFB124Q8NES8 71 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 OR2T34Q8NGX1 318 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 CYB5D2Q8WUJ1 264 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 BIRC7Q96CA5 298 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 MRFAP1L1Q96HT8 127 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 SPAG5Q96R06 1193 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 HAPLN3Q96S86 360 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 CDC6Q99741 560 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 FEM1AQ9BSK4 669 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 C6orf106Q9H6K1 298 aaPredicted RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 ACP6Q9NPH0 428 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 ANO10Q9NW15 660 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 PPARGC1AQ9UBK2 798 aaKnown RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 TJP2Q9UDY2 1190 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 XPO7Q9UIA9 1087 aaKnown RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 TMEM59LQ9UK28 342 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 DNAJC12Q9UKB3 198 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 AJAP1Q9UKB5 411 aaPredicted RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 PCOLCE2Q9UKZ9 415 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
VIM2P-201ENST00000402383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 TDRD6O60522 2096 aaKnown RBP6.78□□□□□ -1.32
VIM2P-201ENST00000402383 LRRK1Q38SD2 2015 aa6.77□□□□□ -1.32
VIM2P-201ENST00000402383 A0A1W2PR77 199 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 LRRC72A6NJI9 287 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 MEI4A8MW99 385 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 E9PAM4 449 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 F8VZ95 297 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 I6L893 689 aaPredicted RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 DYNC1I1O14576 645 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 PLRG1O43660 514 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 SIN3BO75182 1162 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 CALCAP01258 141 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ERBB2P04626 1255 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 CYP1A1P04798 512 aaPredicted RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 HLA-EP13747 358 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 MMP8P22894 467 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 DRD3P35462 400 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 MTIF2P46199 727 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ZNF165P49910 485 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 GALCP54803 685 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 NOMO3P69849 1222 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 SLC20A2Q08357 652 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 KCNJ12Q14500 433 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 SUZ12Q15022 739 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 TRIP6Q15654 476 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 CAMK4Q16566 473 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 HLA-BQ31612 363 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 MANEALQ5VSG8 457 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 RAP1GAP2Q684P5 730 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 KIAA0895LQ68EN5 471 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 GJB7Q6PEY0 223 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 UNQ6494/PRO21346Q6UXR6 183 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 FAM183BPQ6ZVS7 135 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 DSG4Q86SJ6 1040 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 TRIM69Q86WT6 500 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 XYLT1Q86Y38 959 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 NAXDQ8IW45 347 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 LGI2Q8N0V4 545 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ZCCHC9Q8N567 271 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 SH2D3CQ8N5H7 860 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 TMIEQ8NEW7 156 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 CENPIQ92674 756 aaPredicted RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 C18orf8Q96DM3 657 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 SCNM1Q9BWG6 230 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 NAT10Q9H0A0 1025 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 GANQ9H2C0 597 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 CBX8Q9HC52 389 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 TM9SF3Q9HD45 589 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 TM7SF3Q9NS93 570 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 DDIT4Q9NX09 232 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ARHGAP20Q9P2F6 1191 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 EIF2B4Q9UI10 523 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 SLCO3A1Q9UIG8 710 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 NOCTQ9UK39 431 aaKnown RBP6.77□□□□□ -1.33
VIM2P-201ENST00000402383 STAP1Q9ULZ2 295 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 DMTF1Q9Y222 760 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 NCKAP1Q9Y2A7 1128 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ANKRD6Q9Y2G4 727 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 CEP83Q9Y592 693 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 PCDHGA1Q9Y5H4 931 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 HS3ST4Q9Y661 456 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
VIM2P-201ENST00000402383 ATXN2Q99700 1313 aaKnown RBP6.76□□□□□ -1.33
VIM2P-201ENST00000402383 ANKRD36A6QL64 1941 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms