RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 GDAP2Q9NXN4 497 aa14.33□□□□□ -0.12
ATG3-202ENST00000402314 CEPT1Q9Y6K0 416 aa14.33□□□□□ -0.12
ATG3-202ENST00000402314 PLXNB2O15031 1838 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 ARHGAP10A1A4S6 786 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 CHRNGP07510 517 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 RALBP11234 206 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 HOXD8P13378 290 aaPredicted RBP14.32□□□□□ -0.12
ATG3-202ENST00000402314 NCAM1P13591 858 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 MTTPP55157 894 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 CYP2R1Q6VVX0 501 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 NAPRTQ6XQN6 538 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 HASPINQ8TF76 798 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 ZNF669Q96BR6 464 aaPredicted RBP14.32□□□□□ -0.12
ATG3-202ENST00000402314 MFSD3Q96ES6 412 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 TNIP3Q96KP6 325 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 ZNF560Q96MR9 790 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 MIOSQ9NXC5 875 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 RRN3Q9NYV6 651 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 NDUFA13Q9P0J0 144 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 PLOD2O00469 737 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 PRKCGP05129 697 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 TYK2P29597 1187 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 ACADSBP45954 432 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 NUMBP49757 651 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 NIPAL4Q0D2K0 466 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 PCDH20Q8N6Y1 951 aaKnown RBP14.32□□□□□ -0.12
ATG3-202ENST00000402314 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 TSPAN14Q8NG11 270 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 JADE3Q92613 823 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 HNRNPABQ99729 332 aaKnown RBP14.32□□□□□ -0.12
ATG3-202ENST00000402314 NPAS2Q99743 824 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 MRPS26Q9BYN8 205 aaKnown RBP14.32□□□□□ -0.12
ATG3-202ENST00000402314 ADA2Q9NZK5 511 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 EBF1Q9UH73 591 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 ANKRD12Q6UB98 2062 aa14.32□□□□□ -0.12
ATG3-202ENST00000402314 MBLAC1A4D2B0 266 aaPredicted RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 ZBTB24O43167 697 aaPredicted RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 PSEN2P49810 448 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 TBCCQ15814 346 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 SV2CQ496J9 727 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 RNF168Q8IYW5 571 aaPredicted RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 DSELQ8IZU8 1212 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 ZMIZ2Q8NF64 920 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 ZC3H15Q8WU90 426 aaKnown RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 KLHL32Q96NJ5 620 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 BTBD9Q96Q07 612 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 SMOQ99835 787 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 NUF2Q9BZD4 464 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 DDIT4Q9NX09 232 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 ZSWIM8A7E2V4 1837 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 PLIN3O60664 434 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 RNASEH2AO75792 299 aaKnown RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 COL6A2P12110 1019 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 NOS2P35228 1153 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 ADRA1BP35368 520 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 RPL34P49207 117 aaKnown RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 CLCNKBP51801 687 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 IRF9Q00978 393 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 ATP1A4Q13733 1029 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 CEACAM7Q14002 265 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 LAYNQ6UX15 382 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 CLVS1Q8IUQ0 354 aaPredicted RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 NUP93Q8N1F7 819 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 WNT8BQ93098 351 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 PCED1BQ96HM7 432 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 SENP8Q96LD8 212 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 C20orf96Q9NUD7 363 aaPredicted RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 MORF4L1Q9UBU8 362 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 C7orf72A4D263 438 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 DAB1O75553 588 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 PSMC3P17980 439 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 DPP6P42658 865 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 NDST2P52849 883 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 SLC5A3P53794 718 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 ZBTB17Q13105 803 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 IL23RQ5VWK5 629 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 XKR5Q6UX68 686 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 CIB1Q99828 191 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 PAIP1Q9H074 479 aaKnown RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 INIPQ9NRY2 104 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 EPS15L1Q9UBC2 864 aa14.31□□□□□ -0.12
ATG3-202ENST00000402314 RSL24D1Q9UHA3 163 aaKnown RBP14.31□□□□□ -0.12
ATG3-202ENST00000402314 TTC3P53804 2025 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 MYADML2A6NDP7 307 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 KCNE1P15382 129 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 HDCP19113 662 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 MPSTP25325 297 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 PTPN3P26045 913 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 GLRBP48167 497 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 ABCE1P61221 599 aaKnown RBP14.3□□□□□ -0.12
ATG3-202ENST00000402314 ADAM17P78536 824 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 DPYSQ14117 519 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 ADGRE1Q14246 886 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 KRT80Q6KB66 452 aa14.3□□□□□ -0.12
ATG3-202ENST00000402314 PNPLA1Q8N8W4 532 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms