RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 PSTKQ8IV42 348 aaKnown RBP21.28■■□□□ 1
CTCF-202ENST00000401394 TRIML2Q8N7C3 387 aa21.28■■□□□ 1
CTCF-202ENST00000401394 TXNDC5Q8NBS9 432 aaKnown RBP21.28■■□□□ 1
CTCF-202ENST00000401394 TMEM79Q9BSE2 394 aa21.28■■□□□ 1
CTCF-202ENST00000401394 MRPS26Q9BYN8 205 aaKnown RBP21.28■■□□□ 1
CTCF-202ENST00000401394 TLK1Q9UKI8 766 aa21.28■■□□□ 1
CTCF-202ENST00000401394 PCDHGA7Q9Y5G6 932 aa21.28■■□□□ 1
CTCF-202ENST00000401394 CCL22O00626 93 aa21.27■■□□□ 1
CTCF-202ENST00000401394 BCAS2O75934 225 aaPredicted RBP21.27■■□□□ 1
CTCF-202ENST00000401394 YWHAQP27348 245 aa21.27■■□□□ 1
CTCF-202ENST00000401394 MATKP42679 507 aa21.27■■□□□ 1
CTCF-202ENST00000401394 CXCR3P49682 368 aa21.27■■□□□ 1
CTCF-202ENST00000401394 ITPRIPL1Q6GPH6 555 aa21.27■■□□□ 1
CTCF-202ENST00000401394 HMBOX1Q6NT76 420 aa21.27■■□□□ 1
CTCF-202ENST00000401394 PLPPR4Q7Z2D5 763 aa21.27■■□□□ 1
CTCF-202ENST00000401394 PGAM4Q8N0Y7 254 aa21.27■■□□□ 1
CTCF-202ENST00000401394 TSPAN14Q8NG11 270 aa21.27■■□□□ 1
CTCF-202ENST00000401394 LPGAT1Q92604 370 aa21.27■■□□□ 1
CTCF-202ENST00000401394 KPNA7A9QM74 516 aa21.27■■□□□ 1
CTCF-202ENST00000401394 FBP2O00757 339 aa21.27■■□□□ 1
CTCF-202ENST00000401394 HBP1O60381 514 aa21.27■■□□□ 1
CTCF-202ENST00000401394 PSMC3P17980 439 aa21.27■■□□□ 1
CTCF-202ENST00000401394 BST2Q10589 180 aaKnown RBP21.27■■□□□ 1
CTCF-202ENST00000401394 LIPMQ5VYY2 423 aa21.27■■□□□ 1
CTCF-202ENST00000401394 ZC3HC1Q86WB0 502 aaKnown RBP21.27■■□□□ 1
CTCF-202ENST00000401394 ANKRD52Q8NB46 1076 aa21.27■■□□□ 1
CTCF-202ENST00000401394 KDM1BQ8NB78 822 aa21.27■■□□□ 1
CTCF-202ENST00000401394 PHF21BQ96EK2 531 aa21.27■■□□□ 1
CTCF-202ENST00000401394 SMARCAD1Q9H4L7 1026 aa21.27■■□□□ 1
CTCF-202ENST00000401394 ZNF385DQ9H6B1 395 aa21.27■■□□□ 1
CTCF-202ENST00000401394 CHST12Q9NRB3 414 aa21.27■■□□□ 1
CTCF-202ENST00000401394 EBF1Q9UH73 591 aa21.27■■□□□ 1
CTCF-202ENST00000401394 TMCO1Q9UM00 188 aa21.27■■□□□ 1
CTCF-202ENST00000401394 ANKRD12Q6UB98 2062 aa21.27■■□□□ 1
CTCF-202ENST00000401394 SAC3D1A6NKF1 404 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 ZNF839A8K0R7 811 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 TGFB3P10600 412 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 PSME3P61289 254 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 SOX4Q06945 474 aaPredicted RBP21.27■□□□□ 0.99
CTCF-202ENST00000401394 PPIDQ08752 370 aaKnown RBP21.27■□□□□ 0.99
CTCF-202ENST00000401394 TRIM67Q6ZTA4 783 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 AHI1Q8N157 1196 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 PPWD1Q96BP3 646 aaKnown RBP21.27■□□□□ 0.99
CTCF-202ENST00000401394 RHOBTB2Q9BYZ6 727 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 SOX17Q9H6I2 414 aaPredicted RBP21.27■□□□□ 0.99
CTCF-202ENST00000401394 ZNF696Q9H7X3 374 aa21.27■□□□□ 0.99
CTCF-202ENST00000401394 TIMM13Q9Y5L4 95 aaPredicted RBP21.27■□□□□ 0.99
CTCF-202ENST00000401394 AP2A1O95782 977 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 ADARP55265 1226 aaKnown RBP21.26■□□□□ 0.99
CTCF-202ENST00000401394 CLEC6AQ6EIG7 209 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 ESRP1Q6NXG1 681 aaKnown RBP21.26■□□□□ 0.99
CTCF-202ENST00000401394 ZYG11AQ6WRX3 759 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 CHST15Q7LFX5 561 aaPredicted RBP21.26■□□□□ 0.99
CTCF-202ENST00000401394 RIOX2Q8IUF8 465 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 AFG1LQ8WV93 481 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 TMEM30AQ9NV96 361 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 ARHGEF37A1IGU5 675 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 PRDX6P30041 224 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 GLUD2P49448 558 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 GPRIN1Q7Z2K8 1008 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 OSTM1Q86WC4 334 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 DTNBP1Q96EV8 351 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 Q9H521 79 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 EFCAB1Q9HAE3 211 aa21.26■□□□□ 0.99
CTCF-202ENST00000401394 PRPF19Q9UMS4 504 aaKnown RBP21.26■□□□□ 0.99
CTCF-202ENST00000401394 SDHDO14521 159 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 LGALS2P05162 132 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 HOXA11P31270 313 aaPredicted RBP21.25■□□□□ 0.99
CTCF-202ENST00000401394 CHRNA4P43681 627 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 MAP3K7CLP57077 242 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 IKBKEQ14164 716 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 SLC25A52Q3SY17 297 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 AGKQ53H12 422 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 KLHL35Q6PF15 583 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 LDB1Q86U70 411 aaPredicted RBP21.25■□□□□ 0.99
CTCF-202ENST00000401394 HERC6Q8IVU3 1022 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 CHERPQ8IWX8 916 aaKnown RBP21.25■□□□□ 0.99
CTCF-202ENST00000401394 ERLEC1Q96DZ1 483 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 SLC2A11Q9BYW1 496 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 SETD4Q9NVD3 440 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 DMTF1Q9Y222 760 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 AP4S1Q9Y587 144 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 SOCS2O14508 198 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 DCLK1O15075 740 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 FYNP06241 537 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 DBN1Q16643 649 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 FBXO48Q5FWF7 155 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 METTL21CQ5VZV1 264 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 C4orf22Q6V702 233 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 ADCY4Q8NFM4 1077 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 CNDP1Q96KN2 507 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 EPB41L1Q9H4G0 881 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 OLAHQ9NV23 265 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 KIAA1257Q9ULG3 409 aa21.25■□□□□ 0.99
CTCF-202ENST00000401394 YJEFN3A6XGL0 299 aa21.24■□□□□ 0.99
CTCF-202ENST00000401394 DESP17661 470 aa21.24■□□□□ 0.99
CTCF-202ENST00000401394 ENTPD1P49961 510 aa21.24■□□□□ 0.99
CTCF-202ENST00000401394 TNFAIP2Q03169 654 aa21.24■□□□□ 0.99
CTCF-202ENST00000401394 DPYSQ14117 519 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms