RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 GIMAP2Q9UG22 337 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PIRO00625 290 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PGK1P00558 417 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PSEN2P49810 448 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 GK3PQ14409 553 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 LBRQ14739 615 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 FAM83EQ2M2I3 478 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 CNSTQ6PJW8 725 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 METTL23Q86XA0 190 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 OR52K2Q8NGK3 314 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PDCD6IPQ8WUM4 868 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 APBB2Q92870 758 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 TMEM209Q96SK2 561 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 MRPL1Q9BYD6 325 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 TRIM8Q9BZR9 551 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 CAAP1Q9H8G2 361 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 TTC3P53804 2025 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 CCDC166P0CW27 439 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 NSUN2Q08J23 767 aaKnown RBP eCLIP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PTPRCAPQ14761 206 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 ZNF792Q3KQV3 632 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 PAQR9Q6ZVX9 377 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 OR9I1Q8NGQ6 314 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 BLOC1S5Q8TDH9 187 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 CENPIQ92674 756 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 ALG9Q9H6U8 611 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 EFCAB1Q9HAE3 211 aa12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 SARS2Q9NP81 518 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-202ENST00000400555 NRCAMQ92823 1304 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 ZCWPW2A0A1B0GU75 182 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 C17orf102A2RUQ5 167 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 RGSL1A5PLK6 1076 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 F8W810 466 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 DLX3O60479 287 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 GPR32O75388 356 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 PRKCGP05129 697 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 MPOP05164 745 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 RBM20Q5T481 1227 aaKnown RBP12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 SCIMPQ6UWF3 145 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 C16orf89Q6UX73 402 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 TIFABQ6ZNK6 161 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 CEP97Q8IW35 865 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 NUP93Q8N1F7 819 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 TBL1YQ9BQ87 522 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 IL22Q9GZX6 179 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 MIOSQ9NXC5 875 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 ST3GAL5Q9UNP4 418 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 G3V2L1 256 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 UQCRBP14927 111 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 GLUD2P49448 558 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 KRT80Q6KB66 452 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 ZBTB46Q86UZ6 589 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 PQLC1Q8N2U9 271 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 TRIML2Q8N7C3 387 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 CNTD1Q8N815 330 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC45A3Q96JT2 553 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 SPON2Q9BUD6 331 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 PRKAA1Q13131 559 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 TUBB3Q13509 450 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 PPP1R3AQ16821 1122 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 LIPMQ5VYY2 423 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 OLFML2BQ68BL8 750 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 NEPROQ6NW34 567 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 DCBLD1Q8N8Z6 715 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 ATP6V1E2Q96A05 226 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 DCUN1D1Q96GG9 259 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 DNAJC28Q9NX36 388 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 EPS15L1Q9UBC2 864 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 MID2Q9UJV3 735 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 RAP2CQ9Y3L5 183 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 WDR81Q562E7 1941 aa12.83□□□□□ -0.36
PPP4R1-202ENST00000400555 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 ALDH1A2O94788 518 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 FYNP06241 537 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 LIN52Q52LA3 116 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 ZNF789Q5FWF6 425 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 EPGNQ6UW88 154 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 HEXDCQ8WVB3 486 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 GATA6Q92908 595 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 FCRL2Q96LA5 508 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 GBA3Q9H227 469 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 Q9H521 79 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 IGSF9Q9P2J2 1179 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 FBXO5Q9UKT4 447 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 DCLK1O15075 740 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 AKAP10O43572 662 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 CLPTM1O96005 669 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 ME2P23368 584 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 CDK7P50613 346 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 MS4A2Q01362 244 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms