RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 TRHDEQ9UKU6 1024 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CROCC2H7BZ55 1655 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 MYMKA6NI61 221 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 EDF1O60869 148 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 CD4P01730 458 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 OTUD3Q5T2D3 398 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 SWSAP1Q6NVH7 229 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 TTC7BQ86TV6 843 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 FAM13CQ8NE31 585 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ZC3H10Q96K80 434 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 RMDN3Q96TC7 470 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 RIT2Q99578 217 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 NT5C1AQ9BXI3 368 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 DGCR6LQ9BY27 220 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 RAVER2Q9HCJ3 691 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ZNF37AP17032 561 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 OR2L3Q8NG85 312 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 OR56A4Q8NGH8 313 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CYP4F12Q9HCS2 524 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SOHLH2Q9NX45 425 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 FAM240BA0A1B0GVZ2 78 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 PNPLA4P41247 253 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 LCN1P1Q5VSP4 162 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SPOCD1Q6ZMY3 1216 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 NCCRP1Q6ZVX7 275 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 ZDHHC17Q8IUH5 632 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 FAM126BQ8IXS8 530 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 GALNT6Q8NCL4 622 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 C15orf40Q8WUR7 153 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 REPS1Q96D71 796 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SEPHS2Q99611 448 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 PCDHGB3Q9Y5G1 929 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 GON4LQ3T8J9 2241 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 MCIDASD6RGH6 385 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 GSC2O15499 205 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 DNAJB5O75953 348 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 RAB27AP51159 221 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 MTM1Q13496 603 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 HKDC1Q2TB90 917 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 FAAH2Q6GMR7 532 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 TRMT11Q7Z4G4 463 aaKnown RBP8.46□□□□□ -1.05
CHD8-201ENST00000399982 FATE1Q969F0 183 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 EXOC2Q96KP1 924 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 RPRD1AQ96P16 312 aaPredicted RBP8.46□□□□□ -1.05
CHD8-201ENST00000399982 MED28Q9H204 178 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 RIBC2Q9H4K1 309 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 POLD4Q9HCU8 107 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 TBC1D13Q9NVG8 400 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.051e-6■□□□□ 10.4
CHD8-201ENST00000399982 MED11Q9P086 117 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 VPS4AQ9UN37 437 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.46□□□□□ -1.05
CHD8-201ENST00000399982 GMPPBQ9Y5P6 360 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 ASTN2O75129 1339 aaPredicted RBP8.46□□□□□ -1.05
CHD8-201ENST00000399982 DHRS12A0PJE2 317 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 AKAP8O43823 692 aaKnown RBP8.46□□□□□ -1.05
CHD8-201ENST00000399982 PTX3P26022 381 aaPredicted RBP8.46□□□□□ -1.05
CHD8-201ENST00000399982 MCAMP43121 646 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 PPP2R2BQ00005 443 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 TMEM62Q0P6H9 643 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 LMBRD2Q68DH5 695 aaPredicted RBP8.46□□□□□ -1.05
CHD8-201ENST00000399982 PRR5LQ6MZQ0 368 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 UCMAQ8WVF2 138 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 IDI2Q9BXS1 227 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 CST11Q9H112 138 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 PLCL2Q9UPR0 1127 aa8.46□□□□□ -1.05
CHD8-201ENST00000399982 RPL9P32969 192 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 PRKCIP41743 596 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ELP6Q0PNE2 266 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 C2orf76Q3KRA6 126 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 DCAF6Q58WW2 860 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 TDRD10Q5VZ19 366 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 CPA5Q8WXQ8 436 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 COL26A1Q96A83 441 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 PTPRHQ9HD43 1115 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 ZNF232Q9UNY5 417 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 FAM237AA0A1B0GTK4 181 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 PMPCBO75439 489 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 MYL9P24844 172 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 RPL21P46778 160 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.46□□□□□ -1.06
CHD8-201ENST00000399982 KATNAL2Q8IYT4 538 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 MYO1HQ8N1T3 1032 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 RASGEF1AQ8N9B8 481 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ETNPPLQ8TBG4 499 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 IGDCC4Q8TDY8 1250 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 REEP2Q9BRK0 252 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ACAT2Q9BWD1 397 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 NCKAP1Q9Y2A7 1128 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 CHST10O43529 356 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 DCXO43602 365 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 PRKD3O94806 890 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 SERPINF2P08697 491 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms