RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PGAM1P18669 254 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 TUBB8Q3ZCM7 444 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 GAREM2Q75VX8 874 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 SLC26A11Q86WA9 606 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 ARL14EPQ8N8R7 260 aaPredicted RBP15.38■□□□□ 0.05
COL25A1-201ENST00000399126 CENPTQ96BT3 561 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 MFSD3Q96ES6 412 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 SMC6Q96SB8 1091 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 PPCSQ9HAB8 311 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 CHRAC1Q9NRG0 131 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 GRID1Q9ULK0 1009 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 IKBKGQ9Y6K9 419 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 FSBPO95073 299 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 ERVK-10P10266 1014 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 MBL2P11226 248 aaPredicted RBP15.38■□□□□ 0.05
COL25A1-201ENST00000399126 MYOGP15173 224 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 CHRNA4P43681 627 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 NAA25Q14CX7 972 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 STXBP5Q5T5C0 1151 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 PLPP4Q5VZY2 271 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 ARMC3Q5W041 872 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 TIGD7Q6NT04 549 aaPredicted RBP15.38■□□□□ 0.05
COL25A1-201ENST00000399126 PGBD5Q8N414 524 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 OR7D4Q8NG98 312 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 ADAMTS19Q8TE59 1207 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 SLC22A17Q8WUG5 538 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 ZNF317Q96PQ6 595 aaPredicted RBP15.38■□□□□ 0.05
COL25A1-201ENST00000399126 FCRL5Q96RD9 977 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 FICDQ9BVA6 458 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL25A1-201ENST00000399126 HMX2A2RU54 273 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 FAM47DPA6NHR8 397 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 H3BNC9 293 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 TLL1O43897 1013 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 TYROBPO43914 113 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 GLDCP23378 1020 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 SLC11A2P49281 568 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 NR1H3Q13133 447 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 PCSK7Q16549 785 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 HHATQ5VTY9 493 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 RBM12BQ8IXT5 1001 aaKnown RBP15.37■□□□□ 0.05
COL25A1-201ENST00000399126 ZNF473Q8WTR7 871 aaKnown RBP15.37■□□□□ 0.05
COL25A1-201ENST00000399126 DYDC1Q8WWB3 177 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 ZNF669Q96BR6 464 aaPredicted RBP15.37■□□□□ 0.05
COL25A1-201ENST00000399126 C17orf80Q9BSJ5 609 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 LRRC40Q9H9A6 602 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 TRIM49D1C9J1S8 452 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 CA4P22748 312 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 GABRR2P28476 465 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 CTNNB1P35222 781 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 DSC2Q02487 901 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 ITKQ08881 620 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 NIPAL4Q0D2K0 466 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 SERINC3Q13530 473 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 PRPSAP1Q14558 356 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 SLC1A5Q15758 541 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 IQCF2Q8IXL9 164 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 BFARQ9NZS9 450 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 SAMD15Q9P1V8 674 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 SLC4A7Q9Y6M7 1214 aa15.37■□□□□ 0.05
COL25A1-201ENST00000399126 ERI2A8K979 691 aaKnown RBP15.36■□□□□ 0.05
COL25A1-201ENST00000399126 MUSKO15146 869 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 ZNF189O75820 626 aaPredicted RBP15.36■□□□□ 0.05
COL25A1-201ENST00000399126 ALDH1A2O94788 518 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 FAM107AO95990 144 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 C8AP07357 584 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
COL25A1-201ENST00000399126 DENND5AQ6IQ26 1287 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 LILRA6Q6PI73 481 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 KLHDC8BQ8IXV7 354 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 LRRC34Q8IZ02 419 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 BHMTQ93088 406 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 PLD4Q96BZ4 506 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 SCYL1Q96KG9 808 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 MRGPRX2Q96LB1 330 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 RAD9AQ99638 391 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 TBL1YQ9BQ87 522 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 GOLGA8TH3BQL2 631 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 EZRP15311 586 aaKnown RBP15.36■□□□□ 0.05
COL25A1-201ENST00000399126 HNRNPDQ14103 355 aaKnown RBP15.36■□□□□ 0.05
COL25A1-201ENST00000399126 POU6F1Q14863 301 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 C5orf22Q49AR2 442 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 MROH9Q5TGP6 573 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 MARC1Q5VT66 337 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 BATF3Q9NR55 127 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 NKIRAS1Q9NYS0 192 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 BLOC1S6Q9UL45 172 aa15.36■□□□□ 0.05
COL25A1-201ENST00000399126 EYSQ5T1H1 3165 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 ZCWPW2A0A1B0GU75 182 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 PYGLP06737 847 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 GSTA2P09210 222 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 PYGBP11216 843 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 CD86P42081 329 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 MAPKAPK2P49137 400 aa15.35■□□□□ 0.05
COL25A1-201ENST00000399126 ANO4Q32M45 955 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms