RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TRIM44Q96DX7 344 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 EXOC2Q96KP1 924 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CD93Q9NPY3 652 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SUN2Q9UH99 717 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PPP1R12AO14974 1030 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZNF185O15231 689 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 INSIG1O15503 277 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CEP104O60308 925 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 GSRP00390 522 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CR2P20023 1033 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HOXA6P31267 233 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 GKP32189 559 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NNMTP40261 264 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CETN2P41208 172 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCNHP51946 323 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NRLP54845 237 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 IFI35P80217 286 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZNF33AQ06730 810 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RFTN1Q14699 578 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZC3H18Q86VM9 953 aaKnown RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CNTD1Q8N815 330 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCNYQ8ND76 341 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TSTD1Q8NFU3 115 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OR2AP1Q8NGE2 309 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC35B2Q8TB61 432 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NELL1Q92832 810 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MRGPRX1Q96LB2 322 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PSKH2Q96QS6 385 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NAPGQ99747 312 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC8A2Q9UPR5 921 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 WASF2Q9Y6W5 498 aa12.61□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TTC24A2A3L6 582 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MCF2LO15068 1137 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 BNIP3LO60238 219 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SYNCRIPO60506 623 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 APBB3O95704 486 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 FGGP02679 453 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HLA-DQB2P05538 268 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MSNP26038 577 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RBL1P28749 1068 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MMP13P45452 471 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 EIF3EP60228 445 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MAXP61244 160 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RHOAP61586 193 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RPS14P62263 151 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CSTF1Q05048 431 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 AP1B1Q10567 949 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 XRCC4Q13426 336 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HNRNPDQ14103 355 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ELAVL3Q14576 367 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 STARD3Q14849 445 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ANGPT1Q15389 498 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ANO7Q6IWH7 933 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TIGD7Q6NT04 549 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CACUL1Q86Y37 369 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TMPRSS6Q8IU80 811 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HMGB4Q8WW32 186 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PBKQ96KB5 322 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 C16orf45Q96MC5 204 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MGME1Q9BQP7 344 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 BRD8Q9H0E9 1235 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 USP29Q9HBJ7 922 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 EBF1Q9UH73 591 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PPM1HQ9ULR3 514 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TTC7AQ9ULT0 858 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
HLA-DQB1-203ENST00000399082 WDFY4Q6ZS81 3184 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HACD1B0YJ81 288 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CES2O00748 559 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ALOX15BO15296 676 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 LIASO43766 372 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 JCHAINP01591 159 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RBP3P10745 1247 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCNB1P14635 433 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PRLRP16471 622 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PTPN3P26045 913 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CHRNA3P32297 505 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 FNTBP49356 437 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NIPAL4Q0D2K0 466 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OASLQ15646 514 aaKnown RBP12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCDC181Q5TID7 509 aa12.59□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MARC1Q5VT66 337 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms