RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 EPS8L1Q8TE68 723 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 ITCHQ96J02 903 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 MBOAT7Q96N66 472 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 TRMOQ9BU70 441 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 FTHL17Q9BXU8 183 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 LHX5Q9H2C1 402 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 PLGRKTQ9HBL7 147 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 ASTN1O14525 1302 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM153BP0C7A2 387 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF286BP0CG31 522 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 NPR3P17342 541 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 YY1P25490 414 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 SOX11P35716 441 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 SNRPD1P62314 119 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNHIT3Q15649 155 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM153CQ494X1 144 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 TRMT11Q7Z4G4 463 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 TPD52L3Q96J77 140 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 HOPXQ9BPY8 73 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 C6orf62Q9GZU0 229 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 DHX33Q9H6R0 707 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 GBA2Q9HCG7 927 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 MAGEL2Q9UJ55 1249 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 C3orf18Q9UK00 162 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 COL5A2P05997 1499 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 AREL1O15033 823 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 OTCP00480 354 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 CATP04040 527 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 HSMCR30P0CW71 290 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ATP6V1C1P21283 382 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 SLC20A2Q08357 652 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 SPIDRQ14159 915 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF846Q147U1 533 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 BRMS1LQ5PSV4 323 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 DUPD1Q68J44 220 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 AGMOQ6ZNB7 445 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 SAMD7Q7Z3H4 446 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 PIWIL4Q7Z3Z4 852 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ZYG11BQ9C0D3 744 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 FBXO28Q9NVF7 368 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF232Q9UNY5 417 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 DMTF1Q9Y222 760 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 PXDNQ92626 1479 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 MST1RQ04912 1400 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 DDTLA6NHG4 134 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 MGRN1O60291 552 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 UGT2B11O75310 529 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 PTPN1P18031 435 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 IL12AP29459 219 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 NOS3P29474 1203 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 FEN1P39748 380 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 MKRN4PQ13434 485 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF57Q68EA5 555 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 USP50Q70EL3 339 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 PEG10Q86TG7 708 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 TLK2Q86UE8 772 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 FUKQ8N0W3 1084 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 PHC3Q8NDX5 983 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 SLC2A14Q8TDB8 520 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 WDR12Q9GZL7 423 aaKnown RBP8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 CDH19Q9H159 772 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 CYLDQ9NQC7 956 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 RIMBP3CA6NJZ7 1639 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 RIMBP3BA6NNM3 1639 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 RIMBP3Q9UFD9 1639 aa8.46□□□□□ -1.06
SPTLC3-201ENST00000399002 CASTOR2A6NHX0 329 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 TEX28O15482 410 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 MSCO60682 206 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 VAPBO95292 243 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 LYPLA2O95372 231 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 PIGNO95427 931 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 TPSB2P20231 275 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 RBL1P28749 1068 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 FMO4P31512 558 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 MLH1P40692 756 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 PSMD4P55036 377 aaKnown RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 ITGADQ13349 1161 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 AUHQ13825 339 aaKnown RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 TPSAB1Q15661 275 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 FSCN1Q16658 493 aaKnown RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 DGKKQ5KSL6 1271 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM183BPQ6ZVS7 135 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 PHF21BQ96EK2 531 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 FAXDC2Q96IV6 333 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 RNF157Q96PX1 679 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 SEPHS2Q99611 448 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 hCG_1818297A0A087WSY0 165 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 PDHXO00330 501 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 ABCB1P08183 1280 aaPredicted RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 ADRA1DP25100 572 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 ADARP55265 1226 aaKnown RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 RAB25P57735 213 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 IFI35P80217 286 aaPredicted RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 SKIV2LQ15477 1246 aaKnown RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 RGS21Q2M5E4 152 aa8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 LSM12Q3MHD2 195 aaKnown RBP8.45□□□□□ -1.06
SPTLC3-201ENST00000399002 SETMARQ53H47 684 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms