RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 OR14C36Q8NHC7 312 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 ZNF564Q8TBZ8 553 aaPredicted RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 FAM71BQ8TC56 605 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 TEKT4Q8WW24 435 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 TSC1Q92574 1164 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 CCDC114Q96M63 670 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 SLC39A8Q9C0K1 460 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 TMEM9BQ9NQ34 198 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 UVRAGQ9P2Y5 699 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 IL36AQ9UHA7 158 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 HPCAL4Q9UM19 191 aa17.01■□□□□ 0.31
APTR-201ENST00000398043 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
APTR-201ENST00000398043 A0A1W2PPC4 97 aa17■□□□□ 0.31
APTR-201ENST00000398043 LRRC72A6NJI9 287 aa17■□□□□ 0.31
APTR-201ENST00000398043 MYO1FO00160 1098 aa17■□□□□ 0.31
APTR-201ENST00000398043 LEFTY1O75610 366 aa17■□□□□ 0.31
APTR-201ENST00000398043 FSBPO95073 299 aa17■□□□□ 0.31
APTR-201ENST00000398043 GSRP00390 522 aa17■□□□□ 0.31
APTR-201ENST00000398043 PRNPP04156 253 aa17■□□□□ 0.31
APTR-201ENST00000398043 H2AFZP0C0S5 128 aa17■□□□□ 0.31
APTR-201ENST00000398043 TMEM253P0C7T8 217 aa17■□□□□ 0.31
APTR-201ENST00000398043 ARSEP51690 589 aa17■□□□□ 0.31
APTR-201ENST00000398043 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
APTR-201ENST00000398043 PPP2CBP62714 309 aa17■□□□□ 0.31
APTR-201ENST00000398043 PPP2CAP67775 309 aa17■□□□□ 0.31
APTR-201ENST00000398043 SMTNL2Q2TAL5 461 aa17■□□□□ 0.31
APTR-201ENST00000398043 POM121L1PQ3SYA9 428 aa17■□□□□ 0.31
APTR-201ENST00000398043 INO80DQ53TQ3 878 aaPredicted RBP17■□□□□ 0.31
APTR-201ENST00000398043 ARSIQ5FYB1 569 aa17■□□□□ 0.31
APTR-201ENST00000398043 PPP6R3Q5H9R7 873 aaPredicted RBP17■□□□□ 0.31
APTR-201ENST00000398043 LEKR1Q6ZMV7 388 aa17■□□□□ 0.31
APTR-201ENST00000398043 H2AFVQ71UI9 128 aa17■□□□□ 0.31
APTR-201ENST00000398043 POLNQ7Z5Q5 900 aa17■□□□□ 0.31
APTR-201ENST00000398043 CASKIN2Q8WXE0 1202 aa17■□□□□ 0.31
APTR-201ENST00000398043 HEPHQ9BQS7 1158 aa17■□□□□ 0.31
APTR-201ENST00000398043 MIR1-1HGQ9H1L0 117 aa17■□□□□ 0.31
APTR-201ENST00000398043 TM9SF3Q9HD45 589 aa17■□□□□ 0.31
APTR-201ENST00000398043 SPTLC3Q9NUV7 552 aa17■□□□□ 0.31
APTR-201ENST00000398043 DONSONQ9NYP3 566 aa17■□□□□ 0.31
APTR-201ENST00000398043 FAM47DPA6NHR8 397 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 BUB1O43683 1085 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 AKR1B10O60218 316 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 PRAMEF11O60813 436 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 TMCC1O94876 653 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 IL4RP24394 825 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 ZNF75DP51815 510 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 GRIK2Q13002 908 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 OR2AP1Q8NGE2 309 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 OR2I1PQ8NGU4 316 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 GRIN3AQ8TCU5 1115 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 CTNNBL1Q8WYA6 563 aaPredicted RBP16.99■□□□□ 0.31
APTR-201ENST00000398043 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 CELF6Q96J87 481 aaKnown RBP16.99■□□□□ 0.31
APTR-201ENST00000398043 HDAC8Q9BY41 377 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 TM6SF2Q9BZW4 377 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 ZWILCHQ9H900 591 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 PCDH18Q9HCL0 1135 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.99■□□□□ 0.31
APTR-201ENST00000398043 DNAAF2Q9NVR5 837 aaKnown RBP16.99■□□□□ 0.31
APTR-201ENST00000398043 HECAQ9UBI9 543 aaPredicted RBP16.99■□□□□ 0.31
APTR-201ENST00000398043 LHX3Q9UBR4 397 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 MFHAS1Q9Y4C4 1052 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 NCOR2Q9Y618 2525 aa16.99■□□□□ 0.31
APTR-201ENST00000398043 J3KR12 359 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 KPNA3O00505 521 aaPredicted RBP16.98■□□□□ 0.31
APTR-201ENST00000398043 WNT9AO14904 365 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 MTA2O94776 668 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 PROSCO94903 275 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 SYPP08247 313 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 GKP32189 559 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 RECQLP46063 649 aaPredicted RBP16.98■□□□□ 0.31
APTR-201ENST00000398043 GRIA4P48058 902 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 CSNK1EP49674 416 aaKnown RBP16.98■□□□□ 0.31
APTR-201ENST00000398043 PAPOLAP51003 745 aaKnown RBP16.98■□□□□ 0.31
APTR-201ENST00000398043 CYTH1Q15438 398 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
APTR-201ENST00000398043 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 TP53INP2Q8IXH6 220 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 MINDY1Q8N5J2 469 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 SNX19Q92543 992 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 HSPH1Q92598 858 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 CCDC42Q96M95 316 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 CSPG4P5Q96PW8 444 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 ZDHHC5Q9C0B5 715 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 ETNK2Q9NVF9 386 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 CTTNBP2NLQ9P2B4 639 aa16.98■□□□□ 0.31
APTR-201ENST00000398043 TPX2Q9ULW0 747 aaKnown RBP16.98■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3DA0A087WVF3 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3IA0A087WXS9 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3EA0A087X179 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3KA0A087X1G2 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3FA6NER0 549 aaPredicted RBP16.97■□□□□ 0.31
APTR-201ENST00000398043 UPK3BL1B0FP48 263 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3LB9A6J9 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 UPK3BL2E5RIL1 263 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 H3BRJ5 948 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 LCA5LO95447 670 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 POP4O95707 220 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms