RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TRIM38O00635 465 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 WNT9AO14904 365 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 MAN1A2O60476 641 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 RNGTTO60942 597 aaKnown RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 SEC24AO95486 1093 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 AMY2AP04746 511 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 APODP05090 189 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 KRT19P08727 400 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 ZNF883P0CG24 379 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 TDGF1P13385 188 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 NCAM1P13591 858 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 AMY2BP19961 511 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 GABRR2P28476 465 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 LSP1P33241 339 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 GRK3P35626 688 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 PRKCIP41743 596 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 ARL4DP49703 201 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 KCNQ1P51787 676 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 DGKEP52429 567 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 SLC20A2Q08357 652 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 RUNX3Q13761 415 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 BLMHQ13867 455 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 MTF1Q14872 753 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 EXOC3L4Q17RC7 722 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 MGAT5BQ3V5L5 792 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 BTBD8Q5XKL5 378 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 CWF19L1Q69YN2 538 aaKnown RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 GRASPQ7Z6J2 395 aaPredicted RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 CCDC117Q8IWD4 279 aaPredicted RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 CACNA2D3Q8IZS8 1091 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 OR6B3Q8NGW1 331 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 LMO3Q8TAP4 145 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 SNRNP27Q8WVK2 155 aaKnown RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 ARL8AQ96BM9 186 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 LRIG1Q96JA1 1093 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 FCRL3Q96P31 734 aaPredicted RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 PPP1R2P1Q96PQ5 205 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 TRIT1Q9H3H1 467 aaKnown RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 PCIF1Q9H4Z3 704 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 BRD9Q9H8M2 597 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 CISHQ9NSE2 258 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 LMBRD1Q9NUN5 540 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 AMACRQ9UHK6 382 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 GDF2Q9UK05 429 aaPredicted RBP3.9□□□□□ -1.79
UBE3A-202ENST00000397954 MTUS1Q9ULD2 1270 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 NUMBLQ9Y6R0 609 aa3.9□□□□□ -1.79
UBE3A-202ENST00000397954 SHISA3A0PJX4 238 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 LGALS16A8MUM7 142 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 HEPACAM2A8MVW5 462 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 NT5C1B-RDH14C9J2C7 533 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CCL16O15467 120 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 RGS9O75916 674 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ENDOD1O94919 500 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 EPN2O95208 641 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 PENKP01210 267 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 IGLV3-25P01717 112 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 HARSP12081 509 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 GZMAP12544 262 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CEBPBP17676 345 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 NAT1P18440 290 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 RAD52P43351 418 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ITGA8P53708 1063 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 RAD23BP54727 409 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MYL6P60660 151 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CEBPZQ03701 1054 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ZNF33AQ06730 810 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 DLX2Q07687 328 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 STARD3Q14849 445 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 TIGD6Q17RP2 521 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 FAM78AQ5JUQ0 283 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 GLRA4Q5JXX5 417 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ANKRD40Q6AI12 368 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 VITQ6UXI7 678 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 C8orf86Q6ZUL3 223 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLC26A9Q7LBE3 791 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 DAAM2Q86T65 1068 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 VPS36Q86VN1 386 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 FAM71AQ8IYT1 594 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 ATP6V0D2Q8N8Y2 350 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SLC4A11Q8NBS3 891 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 HJURPQ8NCD3 748 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 TMEM35BQ8NCS4 154 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 OR5B17Q8NGF7 314 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 UBASH3BQ8TF42 649 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 FBXO32Q969P5 355 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 NTAN1Q96AB6 310 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 FAM131CQ96AQ9 280 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 CNOT6LQ96LI5 555 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 PNKPQ96T60 521 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MIPEPQ99797 713 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 GABRG3Q99928 467 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SH2D3AQ9BRG2 576 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 INTS2Q9H0H0 1204 aaKnown RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 USP29Q9HBJ7 922 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 LRFN1Q9P244 771 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 RCOR3Q9P2K3 495 aaPredicted RBP3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SUN2Q9UH99 717 aa3.89□□□□□ -1.79
UBE3A-202ENST00000397954 SH3BP1Q9Y3L3 701 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms