RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 ZNF711Q9Y462 761 aa9.45□□□□□ -0.9
UCA1-201ENST00000397381 RAD54BQ9Y620 910 aa9.45□□□□□ -0.9
UCA1-201ENST00000397381 TRIP11Q15643 1979 aa9.45□□□□□ -0.9
UCA1-201ENST00000397381 TRIM64A6NGJ6 449 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 TARM1B6A8C7 271 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 AP3B1O00203 1094 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 SUPT3HO75486 399 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 CSPG5O95196 566 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 TGFB3P10600 412 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 MYF6P23409 242 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 CCR10P46092 362 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 NME5P56597 212 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ITGA7Q13683 1181 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 GRM3Q14832 879 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ZNF829Q3KNS6 432 aaPredicted RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 SLC10A6Q3KNW5 377 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 INTS11Q5TA45 600 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 REP15Q6BDI9 236 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 LRRC8EQ6NSJ5 796 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 HMBOX1Q6NT76 420 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 TTC33Q6PID6 262 aaPredicted RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 ELMSAN1Q6PJG2 1045 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 GK5Q6ZS86 529 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 DNAAF3Q8N9W5 541 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 FAM47BQ8NA70 645 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ZNF280CQ8ND82 737 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 GRIN3AQ8TCU5 1115 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 CIB1Q99828 191 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 B3GNT5Q9BYG0 378 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 PCDHAC1Q9H158 963 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PRDM12Q9H4Q4 367 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 C8orf4Q9NR00 106 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 FAM49BQ9NUQ9 324 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 KLHL8Q9P2G9 620 aaPredicted RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 CD300AQ9UGN4 299 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 EBF1Q9UH73 591 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 RUVBL2Q9Y230 463 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 HEMK1Q9Y5R4 338 aaPredicted RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PSMD12O00232 456 aaPredicted RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PLOD2O00469 737 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 AKAP10O43572 662 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 DLX3O60479 287 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 SRP72O76094 671 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 JUNP05412 331 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PDGFRBP09619 1106 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 NELFEP18615 380 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 FGFR3P22607 806 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ABCG1P45844 678 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ACADSBP45954 432 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 CDH15P55291 814 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 DNAJB13P59910 316 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 PRKCQQ04759 706 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 USP10Q14694 798 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PSMD5Q16401 504 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 TREML2Q5T2D2 321 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ITPRIPL1Q6GPH6 555 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 FAM45BPQ6NSW5 357 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PLPPR4Q7Z2D5 763 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ERMP1Q7Z2K6 904 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 PIWIL4Q7Z3Z4 852 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 ACOT1Q86TX2 421 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 ZC3HC1Q86WB0 502 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 CAMK1DQ8IU85 385 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 COLGALT2Q8IYK4 626 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 PYROXD2Q8N2H3 581 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 FAM45AQ8TCE6 357 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 RNF139Q8WU17 664 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 DOK1Q99704 481 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 CEP41Q9BYV8 373 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 NOL11Q9H8H0 719 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 MRM3Q9HC36 420 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 PALMDQ9NP74 551 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 IARS2Q9NSE4 1012 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 TMEM181Q9P2C4 612 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 TDRKHQ9Y2W6 561 aaKnown RBP9.44□□□□□ -0.9
UCA1-201ENST00000397381 HES2Q9Y543 173 aa9.44□□□□□ -0.9
UCA1-201ENST00000397381 DYTNA2CJ06 578 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 C7P10643 843 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 DNAJB2P25686 324 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 RPL34P49207 117 aaKnown RBP9.43□□□□□ -0.9
UCA1-201ENST00000397381 KPNA2P52292 529 aaKnown RBP9.43□□□□□ -0.9
UCA1-201ENST00000397381 GTF2A2P52657 109 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 NAA20P61599 178 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 POU5F1BQ06416 359 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 BST2Q10589 180 aaKnown RBP9.43□□□□□ -0.9
UCA1-201ENST00000397381 FSTL1Q12841 308 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 FASTKQ14296 549 aaKnown RBP9.43□□□□□ -0.9
UCA1-201ENST00000397381 DGKDQ16760 1214 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 UGP2Q16851 508 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 SOWAHAQ2M3V2 549 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 KCTD11Q693B1 232 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 CATSPERGQ6ZRH7 1159 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 UNC93AQ86WB7 457 aa9.43□□□□□ -0.9
UCA1-201ENST00000397381 DHFR2Q86XF0 187 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms