RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 UAP1L1Q3KQV9 507 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 PPM1JQ5JR12 505 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.85□□□□□ -0.03
SEC13-208ENST00000397109 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 FAM131CQ96AQ9 280 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 L2HGDHQ9H9P8 463 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 SARDHQ9UL12 918 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 ADAMTS9Q9P2N4 1935 aa14.85□□□□□ -0.03
SEC13-208ENST00000397109 PCDH15Q96QU1 1955 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 PCNX2A6NKB5 2137 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 KDELR3O43731 214 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 OPHN1O60890 802 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 MIPP30301 263 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 PCK1P35558 622 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 TPI1P60174 286 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 ZNF252P-AS1Q0IIN9 211 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
SEC13-208ENST00000397109 PARP15Q460N3 678 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 CCDC122Q5T0U0 273 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 IL27RAQ6UWB1 636 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 MINDY1Q8N5J2 469 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 ARFGAP1Q8N6T3 406 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 TSGA10Q9BZW7 698 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 TRIM7Q9C029 511 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 DHX35Q9H5Z1 703 aaKnown RBP14.84□□□□□ -0.03
SEC13-208ENST00000397109 LUC7LQ9NQ29 371 aaKnown RBP14.84□□□□□ -0.03
SEC13-208ENST00000397109 FSCN3Q9NQT6 498 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 DYRK4Q9NR20 520 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 DNAAF2Q9NVR5 837 aaKnown RBP14.84□□□□□ -0.03
SEC13-208ENST00000397109 PCSK1NQ9UHG2 260 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 CABIN1Q9Y6J0 2220 aa14.84□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3DA0A087WVF3 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3IA0A087WXS9 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3EA0A087X179 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3KA0A087X1G2 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 UQCRHLA0A096LP55 91 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 A0A1W2PPC4 97 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3FA6NER0 549 aaPredicted RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 UPK3BL1B0FP48 263 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3LB9A6J9 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 UPK3BL2E5RIL1 263 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 KPNA3O00505 521 aaPredicted RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 CTIFO43310 598 aaKnown RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 KRT86O43790 486 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 CYP1A2P05177 515 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 IGHV4-34P06331 123 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 UQCRHP07919 91 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3HP0C7X1 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 CSRP1P21291 193 aaKnown RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 CASQ1P31415 396 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 NUDT1P36639 197 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 DNA2P51530 1060 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 GRIK2Q13002 908 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 SLC14A1Q13336 389 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 SPA17Q15506 151 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 CARD16Q5EG05 197 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3GQ6DHY5 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3CQ6IPX1 549 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 SYT10Q6XYQ8 523 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 DPY19L3Q6ZPD9 716 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 ZNF354CQ86Y25 554 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TBC1D3Q8IZP1 549 aaPredicted RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 UMODL1-AS1Q8N2C9 162 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 CASKIN2Q8WXE0 1202 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 ZNF592Q92610 1267 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 PPP1R16AQ96I34 528 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 HEPHQ9BQS7 1158 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 SNRNP25Q9BV90 132 aaKnown RBP14.83□□□□□ -0.03
SEC13-208ENST00000397109 THAP2Q9H0W7 228 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TNKS2Q9H2K2 1166 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 TM9SF3Q9HD45 589 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 IL36AQ9UHA7 158 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 IP6K2Q9UHH9 426 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 INTUQ9ULD6 942 aa14.83□□□□□ -0.03
SEC13-208ENST00000397109 MED19A0JLT2 244 aaPredicted RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 C10orf142B7Z368 130 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 EEF2KO00418 725 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 DAPK3O43293 454 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 PLRG1O43660 514 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 LRCH4O75427 683 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 ZNF821O75541 412 aaPredicted RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 CER1O95813 267 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 CD160O95971 181 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 CTSLP07711 333 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 GRIA4P48058 902 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 NDST2P52849 883 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 METAP1P53582 386 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 GNG11P61952 73 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 RACK1P63244 317 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 CNTN1Q12860 1018 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 BOLA3Q53S33 107 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 PRPF39Q86UA1 669 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 CHST14Q8NCH0 376 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 SKA1Q96BD8 255 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 PEBP4Q96S96 227 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 SLC32A1Q9H598 525 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 NOL6Q9H6R4 1146 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 PREBQ9HCU5 417 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 GPATCH2LQ9NWQ4 482 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms