RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 BUB1O43683 1085 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 KDELR3O43731 214 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 CBFA2T3O75081 653 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 RNF8O76064 485 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 ITGAVP06756 1048 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 HTR7P34969 479 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 PRKCIP41743 596 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 CCNHP51946 323 aaPredicted RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 NEK3P51956 506 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 YBEYP58557 167 aaPredicted RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 SNRPD1P62314 119 aaKnown RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 FANCCQ00597 558 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 IL9RQ01113 521 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 RAD51Q06609 339 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 FIGNQ5HY92 759 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 ARTNQ5T4W7 220 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 ZNF571Q7Z3V5 609 aaPredicted RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 LUZP1Q86V48 1076 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 IQCHQ86VS3 1027 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 PLPP6Q8IY26 295 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 PYROXD2Q8N2H3 581 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 CHCHD4Q8N4Q1 142 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 RTL3Q8N8U3 475 aaKnown RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 CASKIN2Q8WXE0 1202 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 ARRDC3Q96B67 414 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 LRIG1Q96JA1 1093 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 SYT11Q9BT88 431 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 MAGEB5Q9BZ81 275 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 TM6SF2Q9BZW4 377 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 ZDHHC6Q9H6R6 413 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 CBX8Q9HC52 389 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 MRPL47Q9HD33 250 aaKnown RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 NDFIP2Q9NV92 336 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 ARHGAP20Q9P2F6 1191 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 FZD10Q9ULW2 581 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 WASF3Q9UPY6 502 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 BZW2Q9Y6E2 419 aaKnown RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 SCINQ9Y6U3 715 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 EIF3CLB5ME19 914 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 C10orf142B7Z368 130 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 KRIT1O00522 736 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 WNT9AO14904 365 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 SLC31A1O15431 190 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 DAPK3O43293 454 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 ZNF821O75541 412 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 POP4O95707 220 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 TOP3BO95985 862 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 WNT1P04628 370 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 MYBL1P10243 752 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 ITGB7P26010 798 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 AKT2P31751 481 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 UBASH3AP57075 661 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 NXPH1P58417 271 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 TAS2R38P59533 333 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 TPI1P60174 286 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 PARP15Q460N3 678 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 TDRD12Q587J7 1177 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 PRAMEF14Q5SWL7 426 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 PLEKHA7Q6IQ23 1121 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 UNQ6494/PRO21346Q6UXR6 183 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 LEKR1Q6ZMV7 388 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 ADAMTS14Q8WXS8 1223 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 IQCDQ96DY2 449 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 KLHDC7BQ96G42 594 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 FEM1CQ96JP0 617 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 EIF3CQ99613 913 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 NCAPGQ9BPX3 1015 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 OSBPL1AQ9BXW6 950 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 ERVMER34-1Q9H9K5 563 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 FTSJ1Q9UET6 329 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 CNOT8Q9UFF9 292 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 WASF2Q9Y6W5 498 aa13.99□□□□□ -0.17
CXCL12-205ENST00000395794 ASCC3Q8N3C0 2202 aaKnown RBP13.99□□□□□ -0.17
CXCL12-205ENST00000395794 TMEM191CA6NGB0 347 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 GOLGA8CPA6NN73 597 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 NEMP1O14524 444 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 TNFSF14O43557 240 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 PRPSAP2O60256 369 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 GSRP00390 522 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 TPM3P06753 285 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 PROS1P07225 676 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 SKILP12757 684 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 ADRB3P13945 408 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 RPS21P63220 83 aaKnown RBP13.98□□□□□ -0.17
CXCL12-205ENST00000395794 NUMA1Q14980 2115 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 SKOR2Q2VWA4 1001 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-205ENST00000395794 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-205ENST00000395794 ZSCAN30Q86W11 494 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 PNPLA1Q8N8W4 532 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 OR2AP1Q8NGE2 309 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 OR6K2Q8NGY2 324 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 KLK6Q92876 244 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 RAB7BQ96AH8 199 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 ZNF653Q96CK0 615 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 GDAP1L1Q96MZ0 367 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
CXCL12-205ENST00000395794 MYO1AQ9UBC5 1043 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 PCSK1NQ9UHG2 260 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms