RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 GBP4Q96PP9 640 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 ERGIC2Q96RQ1 377 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 HDAC8Q9BY41 377 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 OSBPL2Q9H1P3 480 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 CCDC86Q9H6F5 360 aaKnown RBP18.39■□□□□ 0.53
CXCL12-204ENST00000395793 TMEM248Q9NWD8 314 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 ADAM22Q9P0K1 906 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 DNAI1Q9UI46 699 aa18.39■□□□□ 0.53
CXCL12-204ENST00000395793 LDOC1O95751 146 aaPredicted RBP18.38■□□□□ 0.53
CXCL12-204ENST00000395793 KRT3P12035 628 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 RHOQP17081 205 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 GKP32189 559 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 RECQLP46063 649 aaPredicted RBP18.38■□□□□ 0.53
CXCL12-204ENST00000395793 NSFP46459 744 aaKnown RBP18.38■□□□□ 0.53
CXCL12-204ENST00000395793 DNA2P51530 1060 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 UBXN1Q04323 297 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 SLC20A2Q08357 652 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 OVGP1Q12889 678 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 FGL2Q14314 439 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 ARL13BQ3SXY8 428 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 TMEM259Q4ZIN3 620 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 CARD16Q5EG05 197 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 RWDD4Q6NW29 188 aaKnown RBP18.38■□□□□ 0.53
CXCL12-204ENST00000395793 NEK5Q6P3R8 708 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 GCNT7Q6ZNI0 430 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 PARS2Q7L3T8 475 aaKnown RBP18.38■□□□□ 0.53
CXCL12-204ENST00000395793 PYROXD2Q8N2H3 581 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 OXR1Q8N573 874 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 C3orf20Q8ND61 904 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 OR13H1Q8NG92 308 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 TSC1Q92574 1164 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 NTAN1Q96AB6 310 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 HEPHQ9BQS7 1158 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 TM6SF2Q9BZW4 377 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 DYRK4Q9NR20 520 aa18.38■□□□□ 0.53
CXCL12-204ENST00000395793 KNTC1P50748 2209 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 LRRC10BA6NIK2 292 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 CCP110O43303 1012 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 PCDH8O95206 1070 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 PLEKP08567 350 aaPredicted RBP18.37■□□□□ 0.53
CXCL12-204ENST00000395793 THEGLP0DJG4 465 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 GPD1P21695 349 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 ITGB7P26010 798 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 MAPKAPK2P49137 400 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 NEK3P51956 506 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 CLDN2P57739 230 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 LEKR1Q6ZMV7 388 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 GALNT15Q8N3T1 639 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 OR6K2Q8NGY2 324 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 TBC1D31Q96DN5 1066 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 KLHDC7BQ96G42 594 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 SELENOOQ9BVL4 669 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 NOL6Q9H6R4 1146 aaKnown RBP18.37■□□□□ 0.53
CXCL12-204ENST00000395793 ZDHHC6Q9H6R6 413 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 PCDHGA1Q9Y5H4 931 aa18.37■□□□□ 0.53
CXCL12-204ENST00000395793 TRABD2BA6NFA1 517 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 SIGLEC16A6NMB1 481 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 SPINT1O43278 529 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 MAGEC1O60732 1142 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 RFPL3O75679 317 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 CALB1P05937 261 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 ADRB3P13945 408 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 L1CAMP32004 1257 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 ABL2P42684 1182 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 RPL7AP62424 266 aaKnown RBP18.36■□□□□ 0.53
CXCL12-204ENST00000395793 ABI3BPQ7Z7G0 1075 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 SLC22A18ASQ8N1D0 253 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 AOPEPQ8N6M6 819 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 BAP1Q92560 729 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 PPP1R16AQ96I34 528 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 AGPAT1Q99943 283 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 SYT11Q9BT88 431 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 KLC2Q9H0B6 622 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 SEPT11Q9NVA2 429 aaKnown RBP18.36■□□□□ 0.53
CXCL12-204ENST00000395793 FADS3Q9Y5Q0 445 aa18.36■□□□□ 0.53
CXCL12-204ENST00000395793 CACNA1GO43497 2377 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 ITPR1Q14643 2758 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 TRIM38O00635 465 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 RAD51BO15315 384 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 HNRNPA2B1P22626 353 aaKnown RBP18.35■□□□□ 0.53
CXCL12-204ENST00000395793 AKT2P31751 481 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 OGDHQ02218 1023 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 PPP1R15BQ5SWA1 713 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 KDM7AQ6ZMT4 941 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 SLC25A45Q8N413 288 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 NETO2Q8NC67 525 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 ANKRD20A12PQ8NF67 263 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 ISG20Q96AZ6 181 aaKnown RBP18.35■□□□□ 0.53
CXCL12-204ENST00000395793 BMFQ96LC9 184 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 MCEEQ96PE7 176 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 MAGEH1Q9H213 219 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 UCKL1Q9NWZ5 548 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 TAS2R14Q9NYV8 317 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 TMEM63CQ9P1W3 806 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 DKK4Q9UBT3 224 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 GGT7Q9UJ14 662 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 LHX6Q9UPM6 363 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 ITM2BQ9Y287 266 aa18.35■□□□□ 0.53
CXCL12-204ENST00000395793 RAXQ9Y2V3 346 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms