RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CD68P34810 354 aaPredicted RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 ZBTB17Q13105 803 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 ITPRIPL1Q6GPH6 555 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 TANGO2Q6ICL3 276 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 ZNF449Q6P9G9 518 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 PARM1Q6UWI2 310 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 SPATS2Q86XZ4 545 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CNPY4Q8N129 248 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 GSDMBQ8TAX9 411 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CKAP2Q8WWK9 683 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 FGF14Q92915 247 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 WBP2Q969T9 261 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 EPS15L1Q9UBC2 864 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 SDR42E2A6NKP2 422 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 HEPACAM2A8MVW5 462 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 E9PAM4 449 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 KLKB1P03952 638 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 FCARP24071 287 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 CCT5P48643 541 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 FRG1Q14331 258 aaKnown RBP15.38■□□□□ 0.05
SCAF11-204ENST00000395454 ZNF77Q15935 545 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 AAK1Q2M2I8 961 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 PRPF39Q86UA1 669 aaKnown RBP15.38■□□□□ 0.05
SCAF11-204ENST00000395454 LRRC6Q86X45 466 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 UMODL1-AS1Q8N2C9 162 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 ALKBH8Q96BT7 664 aaKnown RBP15.38■□□□□ 0.05
SCAF11-204ENST00000395454 RSPRY1Q96DX4 576 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 BTN2A3PQ96KV6 586 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 SMC6Q96SB8 1091 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 IL12RB2Q99665 862 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 PRMT1Q99873 361 aaKnown RBP15.38■□□□□ 0.05
SCAF11-204ENST00000395454 KXD1Q9BQD3 176 aa15.38■□□□□ 0.05
SCAF11-204ENST00000395454 KLHL8Q9P2G9 620 aaPredicted RBP15.38■□□□□ 0.05
SCAF11-204ENST00000395454 KRT15P19012 456 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 IFNAR2P48551 515 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 SLC11A2P49281 568 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 USP4Q13107 963 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 RGS9BPQ6ZS82 235 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 SH2D5Q6ZV89 423 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 PID1Q7Z2X4 250 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 SLC26A11Q86WA9 606 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 MPP5Q8N3R9 675 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 ATP6V0D2Q8N8Y2 350 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 BPIFB1Q8TDL5 484 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 STAMBPL1Q96FJ0 436 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 CFAP36Q96G28 342 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 LRRC3BQ96PB8 259 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 SIK2Q9H0K1 926 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 TRPV4Q9HBA0 871 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 CASS4Q9NQ75 786 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 NKIRAS1Q9NYS0 192 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 PRDM4Q9UKN5 801 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 AGO1Q9UL18 857 aaKnown RBP15.37■□□□□ 0.05
SCAF11-204ENST00000395454 E2F8A0AVK6 867 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 EBAG9O00559 213 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 ZBTB24O43167 697 aaPredicted RBP15.37■□□□□ 0.05
SCAF11-204ENST00000395454 MAFKO60675 156 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 ASMTLO95671 621 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 PGAM1P18669 254 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 WDR4P57081 412 aaKnown RBP15.37■□□□□ 0.05
SCAF11-204ENST00000395454 RWDD4Q6NW29 188 aaKnown RBP15.37■□□□□ 0.05
SCAF11-204ENST00000395454 MTSS1LQ765P7 747 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 C14orf80Q86SX3 495 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 BBS7Q8IWZ6 715 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 TTC17Q96AE7 1141 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 CEP41Q9BYV8 373 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 DONSONQ9NYP3 566 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 ZNF212Q9UDV6 495 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 NUMBLQ9Y6R0 609 aa15.37■□□□□ 0.05
SCAF11-204ENST00000395454 IQANK1A0A1B0GTG1 560 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 GREM1O60565 184 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 RHOQP17081 205 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 NDST2P52849 883 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 QPCTQ16769 361 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 VITQ6UXI7 678 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 HTR3DQ70Z44 454 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 CNTD1Q8N815 330 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 E2F7Q96AV8 911 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 ELSPBP1Q96BH3 223 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 OXNAD1Q96HP4 312 aaPredicted RBP15.36■□□□□ 0.05
SCAF11-204ENST00000395454 RPP25Q9BUL9 199 aaKnown RBP15.36■□□□□ 0.05
SCAF11-204ENST00000395454 MLPHQ9BV36 600 aaPredicted RBP15.36■□□□□ 0.05
SCAF11-204ENST00000395454 NOL6Q9H6R4 1146 aaKnown RBP15.36■□□□□ 0.05
SCAF11-204ENST00000395454 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 SMYD2Q9NRG4 433 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 TMEM248Q9NWD8 314 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 OBP2AQ9NY56 170 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 LIMD1Q9UGP4 676 aa15.36■□□□□ 0.05
SCAF11-204ENST00000395454 A0A1W2PPM1 405 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MATN3O15232 486 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ACSL4O60488 711 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 INHBAP08476 426 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 TCF3P15923 654 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 SLC18A2Q05940 514 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 TNK2Q07912 1038 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms