RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 HSFY1Q96LI6 401 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SIKE1Q9BRV8 207 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 WDR18Q9BV38 432 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ASTN2O75129 1339 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 PIPSLA2A3N6 862 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 GSAPA4D1B5 854 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 NT5C1B-RDH14C9J2C7 533 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 PDE2AO00408 941 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 LTA4HP09960 611 aaKnown RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 PURAQ00577 322 aaKnown RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 MAMLD1Q13495 774 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ALG11Q2TAA5 492 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 C11orf88Q6PI97 169 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 NKAPQ8N5F7 415 aaKnown RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 STAG3L4Q8TBR4 150 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ATL1Q8WXF7 558 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 KCNMB3Q9NPA1 279 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SLC9A8Q9Y2E8 581 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 C1orf232A0A0U1RR37 186 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CHADO15335 359 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D12O60347 775 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ZSCAN5DPP0CG00 497 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 LBPP18428 481 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 EPORP19235 508 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ABCG1P45844 678 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CRADDP78560 199 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 RALGDSQ12967 914 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TRIM32Q13049 653 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 MSLNQ13421 630 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TARBP2Q15633 366 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TRMT5Q32P41 509 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ITFG1Q8TB96 612 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 S100A13Q99584 98 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 MYOCQ99972 504 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 FAIM2Q9BWQ8 316 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ATAD3AQ9NVI7 634 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ADH1CP00326 375 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 LDLRP01130 860 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 PAX3P23760 479 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 PSMD7P51665 324 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ATP12AP54707 1039 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TREML2Q5T2D2 321 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 PIGZQ86VD9 579 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CHPFQ8IZ52 775 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ZCCHC9Q8N567 271 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 NAT16Q8N8M0 369 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TRIM8Q9BZR9 551 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GPN3Q9UHW5 284 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 SESN1Q9Y6P5 492 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 MAGEC1O60732 1142 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 KRT33AO76009 404 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GLUD1P00367 558 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CTPS1P17812 591 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TTPAP49638 278 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GTF2BQ00403 316 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 FAM187BQ17R55 369 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ANKRD52Q8NB46 1076 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ST13P5Q8NFI4 369 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 L2HGDHQ9H9P8 463 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CHST7Q9NS84 486 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 FGRP09769 529 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 RGS1Q08116 209 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ABRQ12979 859 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GRIK5Q16478 980 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 C16orf46Q6P387 395 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TMPRSS6Q8IU80 811 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 RNASE11Q8TAA1 199 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 OR8D1Q8WZ84 308 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GAS2L1Q99501 681 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 SNRNP25Q9BV90 132 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 MRIQ9BWK5 157 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 OXCT2Q9BYC2 517 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 HIPK3Q9H422 1215 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 SPATA31C2B4DYI2 1134 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TSC22D2O75157 780 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CLPTM1O96005 669 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 DNTTP04053 509 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GJB1P08034 283 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 POLD2P49005 469 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 FRG1Q14331 258 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 TMC3Q7Z5M5 1100 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 OR10G6Q8NH81 332 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ZBTB10Q96DT7 871 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 URADA6NGE7 173 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 E7ENQ6 273 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 FCHO1O14526 889 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 MYL12BO14950 172 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 CCDC166P0CW27 439 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 ATP4AP20648 1035 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GABRR2P28476 465 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GALNT3Q14435 633 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GPAT3Q53EU6 434 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 KYAT3Q6YP21 454 aaKnown RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-203ENST00000394872 FBXL16Q8N461 479 aa10.5□□□□□ -0.73
COL4A6-203ENST00000394872 MAB21L3Q8N8X9 362 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms